Entity Name	Entity type	Gene Symbol	Sources(; separated)	Level4	Level3	Level2	Model_Of_Inheritance	Phenotypes	Omim	Orphanet	HPO	Publications	Description	Flagged	GEL_Status	UserRatings_Green_amber_red	version	ready	Mode of pathogenicity	EnsemblId(GRch37)	EnsemblId(GRch38)	HGNC	Position Chromosome	Position GRCh37 Start	Position GRCh37 End	Position GRCh38 Start	Position GRCh38 End	STR Repeated Sequence	STR Normal Repeats	STR Pathogenic Repeats	Region Haploinsufficiency Score	Region Triplosensitivity Score	Region Required Overlap Percentage	Region Variant Type	Region Verbose Name
AHI1	gene	AHI1	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 3;Joubert syndrome;Joubert syndrome-3.						False	3	100;0;0	4.19	False		ENSG00000135541	ENSG00000135541	HGNC:21575													
ALMS1	gene	ALMS1	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet-Biedl Syndrome;Alstrom syndrome, OMIM:203800				22773737		False	3	0;0;100	4.19	False		ENSG00000116127	ENSG00000116127	HGNC:428													
ANKS6	gene	ANKS6	Expert list;Expert Review Green;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Polycystic Kidney Disease, Nephronophthisis And Related Disorders 22 Gene Panel;Nephronophthisis 16, OMIM:615382				23793029;34740236		False	3	100;0;0	4.19	False		ENSG00000165138	ENSG00000165138	HGNC:26724													
ARL13B	gene	ARL13B	Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 8				18674751;25138100		False	3	100;0;0	4.19	False		ENSG00000169379	ENSG00000169379	HGNC:25419													
ARL6	gene	ARL6	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	{Bardet Biedl syndrome 1, modifier of};Bardet-Biedl Syndrome;268000;Bardet Biedl syndrome 3				15258860;21282186		False	3	100;0;0	4.19	False		ENSG00000113966	ENSG00000113966	HGNC:13210													
B9D2	gene	B9D2	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 34, OMIM:614175;Meckel syndrome 10, OMIM:614175;Meckel syndrome, type 10, MONDO:0013609				26092869;21763481;31411728		False	3	0;0;100	4.19	False		ENSG00000123810	ENSG00000123810	HGNC:28636													
BBS1	gene	BBS1	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet-Biedl syndrome 1 OMIM:209900;Bardet-Biedl syndrome 1 MONDO:0008854				23143442;12118255		False	3	100;0;0	4.19	False		ENSG00000174483	ENSG00000174483	HGNC:966													
BBS10	gene	BBS10	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 10				16582908		False	3	100;0;0	4.19	False		ENSG00000179941	ENSG00000179941	HGNC:26291													
BBS12	gene	BBS12	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 12				17160889		False	3	100;0;0	4.19	False		ENSG00000181004	ENSG00000181004	HGNC:26648													
BBS2	gene	BBS2	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 2				11285252		False	3	100;0;0	4.19	False		ENSG00000125124	ENSG00000125124	HGNC:967													
BBS4	gene	BBS4	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 4				11381270;22353939		False	3	100;0;0	4.19	False		ENSG00000140463	ENSG00000140463	HGNC:969													
BBS5	gene	BBS5	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 5				15137946		False	3	100;0;0	4.19	False		ENSG00000163093	ENSG00000163093	HGNC:970													
BBS7	gene	BBS7	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 7				12567324		False	3	100;0;0	4.19	False		ENSG00000138686	ENSG00000138686	HGNC:18758													
BBS9	gene	BBS9	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 9				16380913		False	3	100;0;0	4.19	False		ENSG00000122507	ENSG00000122507	HGNC:30000													
C5orf42	gene	C5orf42	Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;Oral-facial-digital syndrome type VI;Joubert syndrome 17				22693042;25920555;22425360		False	3	100;0;0	4.19	False		ENSG00000197603	ENSG00000197603	HGNC:25801													
CC2D2A	gene	CC2D2A	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 9;COACH syndrome;Joubert syndrome with oculorenal defect;Meckel syndrome 6;Meckel syndrome						False	3	100;0;0	4.19	False		ENSG00000048342	ENSG00000048342	HGNC:29253													
CENPF	gene	CENPF	Expert Review Green;Orphanet;Radboud University Medical Center, Nijmegen	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Stromme syndrome, OMIM:243605;Lethal fetal brain malformation-duodenal atresia-bilateral renal hypoplasia syndrome				26820108		False	3	33;0;67	4.19	False		ENSG00000117724	ENSG00000117724	HGNC:1857													
CEP104	gene	CEP104	Expert Review Green;Other;Radboud University Medical Center, Nijmegen	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 25, 616781;Joubert syndrome 25				26477546		False	3	100;0;0	4.19	False		ENSG00000116198	ENSG00000116198	HGNC:24866													
CEP164	gene	CEP164	Emory Genetics Laboratory;Expert list;Expert Review Green;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	ciliopathies;Nephronophthisis 15;Senior-Loken syndrome;Nephronophthisis 15, 614845						False	3	0;0;0	4.19	False		ENSG00000110274	ENSG00000110274	HGNC:29182													
CEP290	gene	CEP290	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	610189;Meckel syndrome 4;Senior-Loken syndrome;611755;Joubert syndrome 5;Joubert syndrome with oculorenal defect;610188;Senior-Loken syndrome 6;611134;Meckel syndrome				20690115;18327255		False	3	50;0;50	4.19	False		ENSG00000198707	ENSG00000198707	HGNC:29021													
CEP41	gene	CEP41	Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 15				22246503		False	3	100;0;0	4.19	False		ENSG00000106477	ENSG00000106477	HGNC:12370													
CEP83	gene	CEP83	Expert list;Expert Review Green;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Nephronophthisis 18 615862				24882706		False	3	100;0;0	4.19	False		ENSG00000173588	ENSG00000173588	HGNC:17966													
CRB2	gene	CRB2	Expert Review;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Ventriculomegaly with cystic kidney disease 219730				25557780		False	3	100;0;0	4.19	False		ENSG00000148204	ENSG00000148204	HGNC:18688													
CSPP1	gene	CSPP1	Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;Meckel syndrome;Joubert syndrome 21;Meckel-Gruber syndrome				24360807;24360803;24360808		False	3	100;0;0	4.19	False		ENSG00000104218	ENSG00000104218	HGNC:26193													
DDX59	gene	DDX59	Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Orofaciodigital syndrome V, 174300				29127725;23972372;28711741		False	3	50;0;50	4.19	False		ENSG00000118197	ENSG00000118197	HGNC:25360													
DHCR7	gene	DHCR7	Expert Review Green;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Smith-Lemli-Opitz syndrome, OMIM:270400				9634533		False	3	33;0;67	4.19	False		ENSG00000172893	ENSG00000172893	HGNC:2860													
DLG5	gene	DLG5	Expert Review Green;Literature;NHS GMS	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Yuksel-Vogel-Bauser syndrome, OMIM:620703				32631816;30791088;17765678;35361250		False	3	80;20;0	4.19	False		ENSG00000151208	ENSG00000151208	HGNC:2904													
DYNC2H1	gene	DYNC2H1	Emory Genetics Laboratory;Expert list;Expert Review Green;Orphanet;Other;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Short-rib thoracic dysplasia 3 with or without polydactyly, OMIM:613091						False	3	0;0;0	4.19	False		ENSG00000187240	ENSG00000187240	HGNC:2962													
GLIS2	gene	GLIS2	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;NHS GMS;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Nephronophthisis 7, OMIM:611498				17618285;18227149;23559409;26374130;31676329		False	3	33;0;67	4.19	False		ENSG00000126603	ENSG00000126603	HGNC:29450													
HNF1B	gene	HNF1B	Expert list;Expert Review Green;UKGTN	Renal ciliopathies		Renal	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Polycystic Kidney Disease, Nephronophthisis And Related Disorders 22 Gene Panel						False	3	0;0;100	4.19	False		ENSG00000108753	ENSG00000275410	HGNC:11630													
HYLS1	gene	HYLS1	Emory Genetics Laboratory;Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;Hydrolethalus syndrome, 236680				26830932 - report in two siblings with Joubert syndrome;19656802 - impairment in ciligenesis;18648327 - Hydrolethalus syndrome;15843405 - Hydrolethalus syndrome		False	3	0;0;0	4.19	False		ENSG00000198331	ENSG00000198331	HGNC:26558													
ICK	gene	ICK	Expert Review Green;Literature	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Endocrine-cerebroosteodysplasia, OMIM:612651;Endocrine-cerebro-osteodysplasia syndrome, MONDO:0012980				19185282;27069622;27466187		False	3	0;100;0	4.19	False		ENSG00000112144	ENSG00000112144	HGNC:21219													
IFT122	gene	IFT122	Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Cranioectodermal dysplasia;Cranioectodermal dysplasia 1, 218330				19000668;24027799;23826986;26792575;24689072;20493458		False	3	0;0;0	4.19	False		ENSG00000163913	ENSG00000163913	HGNC:13556													
IFT140	gene	IFT140	Expert Review;Expert Review Green	Renal ciliopathies		Renal	BOTH monoallelic and biallelic, autosomal or pseudoautosomal	Short-rib thoracic dysplasia 9 with or without polydactyly, OMIM:266920;short-rib thoracic dysplasia 9 with or without polydactyly, MONDO:0009964;cystic kidney disease, MONDO:0002473;{Polycystic kidney disease 9, susceptibility to}, OMIM:621164				22503633;23418020;29706353;34890546		False	3	100;0;0	4.19	False		ENSG00000187535	ENSG00000187535	HGNC:29077													
IFT172	gene	IFT172	Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Short-rib thoracic dysplasia 10 with or without polydactyly, OMIM:615630				25168386;30761183;24488770;24140113		False	3	100;0;0	4.19	False		ENSG00000138002	ENSG00000138002	HGNC:30391													
IFT27	gene	IFT27	Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet-Biedl syndrome 19, OMIM:615996				24488770;29704304;30761183		False	3	100;0;0	4.19	False		ENSG00000100360	ENSG00000100360	HGNC:18626													
IFT43	gene	IFT43	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Cranioectodermal dysplasia 3, 614099;Sensenbrenner syndrome;Short-rib thoracic dysplasia 18 with polydactyly, 617866				29896747;28400947;26892345;24027799;21378380;22791528		False	3	67;0;33	4.19	False		ENSG00000119650	ENSG00000119650	HGNC:29669													
INPP5E	gene	INPP5E	Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;Joubert syndrome 1				23386033;26748598		False	3	100;0;0	4.19	False		ENSG00000148384	ENSG00000148384	HGNC:21474													
INVS	gene	INVS	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Senior-Loken syndrome;Nephronophthisis 2, infantile, 602088;Nephronophthisis				12872123		False	3	0;0;0	4.19	False		ENSG00000119509	ENSG00000119509	HGNC:17870													
IQCB1	gene	IQCB1	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Senior-Loken syndrome 5, 609254;Senior-Loken syndrome						False	3	0;0;0	4.19	False		ENSG00000173226	ENSG00000173226	HGNC:28949													
KIAA0586	gene	KIAA0586	Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 23;Joubert syndrome;Short-rib thoracic dysplasia 14 with polydactyly;Short-rib dysplasia 14 with polydactyly				26096313		False	3	100;0;0	4.19	False		ENSG00000100578	ENSG00000100578	HGNC:19960													
KIAA0753	gene	KIAA0753	Expert Review Green;Literature	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	?Orofaciodigital syndrome XV 617127;Joubert syndrome;Short-rib skeletal dysplasia				29138412;28220259;26643951		False	3	50;0;50	4.19	False		ENSG00000198920	ENSG00000198920	HGNC:29110													
KIF7	gene	KIF7	Emory Genetics Laboratory;Expert list;Expert Review Green;Other;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 12   200990;Acrocallosal syndrome   200990				21633164		False	3	100;0;0	4.19	False		ENSG00000166813	ENSG00000166813	HGNC:30497													
LZTFL1	gene	LZTFL1	Emory Genetics Laboratory;Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet-Biedl syndrome 17, 615994				22510444;27312011;23692385		False	3	0;0;100	4.19	False		ENSG00000163818	ENSG00000163818	HGNC:6741													
MAPKBP1	gene	MAPKBP1	Expert Review Green;Literature	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Nephronophthisis 20   617271				28089251		False	3	100;0;0	4.19	False		ENSG00000137802	ENSG00000137802	HGNC:29536													
MKKS	gene	MKKS	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 6;236700				10802661;10973251;10973238		False	3	100;0;0	4.19	False		ENSG00000125863	ENSG00000125863	HGNC:7108													
MKS1	gene	MKS1	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	occipital encephalocele;Joubert syndrome;Bardet-Biedl syndrome;Joubert syndrome 28;249000;polydactyly;polycystic kidneys;Meckel-Gruber syndrome;Meckel syndrome;renal fibrosis				26490104;17437276;18327255;24886560;16415886		False	3	67;0;33	4.19	False	Other - please provide details in the comments	ENSG00000011143	ENSG00000011143	HGNC:7121													
NEK8	gene	NEK8	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Renal-hepatic-pancreatic dysplasia;?Renal-hepatic-pancreatic dysplasia 2, 615415;Nephronophthisis;?Nephronophthisis 9, 613824				18199800;26967905;26862157;26697755;23418306		False	3	67;0;33	4.19	False		ENSG00000160602	ENSG00000160602	HGNC:13387													
NPHP1	gene	NPHP1	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Other;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 4;Senior-Loken syndrome;256100 Senior-Loken syndrome-1, 266900;609583 Nephronophthisis 1, juvenile;Nephronophthisis				15138899;22982934;15689444;34415307		False	3	100;0;0	4.19	False		ENSG00000144061	ENSG00000144061	HGNC:7905													
NPHP3	gene	NPHP3	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Renal-hepatic-pancreatic dysplasia;Senior-Loken syndrome;Nephronophthisis 3, 604387;Meckel syndrome 7, 267010;Renal-hepatic-pancreatic dysplasia 1, 208540;Nephronophthisis						False	3	0;0;0	4.19	False		ENSG00000113971	ENSG00000113971	HGNC:7907													
NPHP4	gene	NPHP4	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Senior-Loken syndrome;Nephronophthisis;Senior-Loken syndrome 4, 606996;Nephronophthisis 4, 606966						False	3	0;0;0	4.19	False		ENSG00000131697	ENSG00000131697	HGNC:19104													
OFD1	gene	OFD1	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)	Joubert syndrome 10;X-linked Joubert syndrome;Orofaciodigital syndrome I				19800048;22353940		False	3	100;0;0	4.19	False		ENSG00000046651	ENSG00000046651	HGNC:2567													
PKD1	gene	PKD1	Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal	Polycystic kidney disease, adult type I, 173900;Autosomal recessive polycystic kidney disease (ARPKD);Autosomal dominant polycystic kidney disease (ADPKD)				23624871;20558538		False	3	100;0;0	4.19	False		ENSG00000008710	ENSG00000008710	HGNC:9008													
PKD2	gene	PKD2	Emory Genetics Laboratory;Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Polycystic kidney disease 2, 613095						False	3	0;0;0	4.19	False		ENSG00000118762	ENSG00000118762	HGNC:9009													
PKHD1	gene	PKHD1	Emory Genetics Laboratory;Expert list;Expert Review Green;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Polycystic kidney disease 4 with or without hepatic disease, OMIM:263200						False	3	0;0;0	4.19	False		ENSG00000170927	ENSG00000170927	HGNC:9016													
PMM2	gene	PMM2	Expert Review Green;Literature	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Congenital disorder of glycosylation, type Ia 212065				9140401		False	3	100;0;0	4.19	False		ENSG00000140650	ENSG00000140650	HGNC:9115													
PSKH1	gene	PSKH1	Expert Review Green;Literature;NHS GMS	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Cholestasis, progressive familial intrahepatic, 13, OMIM:620962				39132680		False	3	100;0;0	4.19	False		ENSG00000159792	ENSG00000159792	HGNC:9529													
RPGRIP1L	gene	RPGRIP1L	Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome 7;Meckel syndrome 5;Joubert syndrome;Meckel syndrome;Meckel-Gruber syndrome				17558409;17558407;19574260		False	3	100;0;0	4.19	False		ENSG00000103494	ENSG00000103494	HGNC:29168													
SDCCAG8	gene	SDCCAG8	Expert list;Expert Review Green;Orphanet	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	SENIOR-LOKEN SYNDROME;Bardet-Biedl Syndrome;613615;Senior-Loken syndrome				22190896		False	3	100;0;0	4.19	False		ENSG00000054282	ENSG00000054282	HGNC:10671													
TCTN1	gene	TCTN1	Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome				20301500;22693042;26489806;21725307;26477546;28631893		False	3	100;0;0	4.19	False		ENSG00000204852	ENSG00000204852	HGNC:26113													
TCTN2	gene	TCTN2	Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Meckel syndrome;Joubert syndrome 24;Joubert syndrome, Meckel-Gruber syndrome				25118024;21565611		False	3	100;0;0	4.19	False		ENSG00000168778	ENSG00000168778	HGNC:25774													
TCTN3	gene	TCTN3	Expert list;Expert Review Green;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;Orofaciodigital syndrome IV;Joubert syndrome 18;Meckel-Gruber;Mohr-Majewski syndrome				25118024;22883145		False	3	100;0;0	4.19	False		ENSG00000119977	ENSG00000119977	HGNC:24519													
TMEM107	gene	TMEM107	Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Meckel syndrome 13 617562;?Joubert syndrome 29 617562;Orofaciodigital syndrome XVI 617563				26518474;26123494;22698544;26595381		False	3	0;0;0	4.19	False		ENSG00000179029	ENSG00000179029	HGNC:28128													
TMEM138	gene	TMEM138	Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome with oculorenal defect;Joubert syndrome 16				22282472		False	3	100;0;0	4.19	False		ENSG00000149483	ENSG00000149483	HGNC:26944													
TMEM216	gene	TMEM216	Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome: Meckel-Gruber syndrome;Joubert syndrome with oculorenal defect;Meckel syndrome;Joubert syndrome 2				22282472;20036350;20512146		False	3	100;0;0	4.19	False		ENSG00000187049	ENSG00000187049	HGNC:25018													
TMEM231	gene	TMEM231	Emory Genetics Laboratory;Expert list;Expert Review Green;Orphanet;Other;Radboud University Medical Center, Nijmegen	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Meckel syndrome;Joubert syndrome 20;Joubert syndrome with oculorenal defect;Joubert syndrome 20, 614970;Meckel syndrome 11, 615397						False	3	0;0;0	4.19	False		ENSG00000205084	ENSG00000205084	HGNC:37234													
TMEM237	gene	TMEM237	Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;Joubert syndrome with oculorenal defect;Joubert syndrome 14				22152675;20301500		False	3	100;0;0	4.19	False		ENSG00000155755	ENSG00000155755	HGNC:14432													
TMEM67	gene	TMEM67	Eligibility statement prior genetic testing;Expert list;Expert Review Green;Orphanet;Other	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Joubert syndrome;nephronophthisis;COACH syndrome;Joubert syndrome 6;?Bardet-Biedl syndrome?;Senior-Boichis syndrome;613550;607361;Meckel-Gruber syndrome;Meckel syndrome;610688;Nephronophthisis 11;216360				PMID: 16415887;PMID: 17160906;PMID: 19058225;PMID: 19508969;PMID: 20607301;PMID: 18327255		False	3	67;0;33	4.19	False		ENSG00000164953	ENSG00000164953	HGNC:28396													
TRAF3IP1	gene	TRAF3IP1	Expert Review Green;Orphanet	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Senior-Loken syndrome 9 616629				26487268		False	3	100;0;0	4.19	False		ENSG00000204104	ENSG00000204104	HGNC:17861													
TTC21B	gene	TTC21B	Emory Genetics Laboratory;Expert list;Expert Review Green;Orphanet;Other;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Nephronophthisis 12, 613820;Short-rib thoracic dysplasia 4 with or without polydactyly;Jeune syndrome;Short-rib thoracic dysplasia 4 with or without polydactyly, 613819;Nephronophthisis				21258341;27515926 (functional study in C. elegans);21068128;24876116 (Focal segmental glomerulosclerosis)		False	3	100;0;0	4.19	False		ENSG00000123607	ENSG00000123607	HGNC:25660													
TTC8	gene	TTC8	Eligibility statement prior genetic testing;Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Bardet Biedl syndrome 8				14520415		False	3	100;0;0	4.19	False		ENSG00000165533	ENSG00000165533	HGNC:20087													
TXNDC15	gene	TXNDC15	Expert list;Expert Review Green	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Meckel syndrome 14, OMIM:619879				27894351		False	3	0;100;0	4.19	False		ENSG00000113621	ENSG00000113621	HGNC:20652													
WDPCP	gene	WDPCP	Emory Genetics Laboratory;Expert list;Expert Review Green;Orphanet;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	?Bardet-Biedl syndrome 15, 615992;Meckel syndrome;?Congenital heart defects, hamartomas of tongue, and polysyndactyly, 217085				20671153		False	3	0;0;100	4.19	False		ENSG00000143951	ENSG00000143951	HGNC:28027													
WDR19	gene	WDR19	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Other;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Nephronophthisis 13, 614377;?Short-rib thoracic dysplasia 5 with or without polydactyly;Senior-Loken syndrome 8, 616307;Cranioectodermal dysplasia;?Short-rib thoracic dysplasia 5 with or without polydactyly, 614376;Jeune syndrome;Senior-Loken syndrome;?Cranioectodermal dysplasia 4, 614378;Nephronophthisis						False	3	0;0;0	4.19	False		ENSG00000157796	ENSG00000157796	HGNC:18340													
WDR35	gene	WDR35	Emory Genetics Laboratory;Expert list;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;Orphanet;Other;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Cranioectodermal dysplasia 2, 613610;Cranioectodermal dysplasia;Short-rib thoracic dysplasia 7 with or without polydactyly;Short-rib thoracic dysplasia 7 with or without polydactyly, 614091						False	3	0;0;0	4.19	False		ENSG00000118965	ENSG00000118965	HGNC:29250													
WDR60	gene	WDR60	Expert list;Expert Review Green;Orphanet;Other;Radboud University Medical Center, Nijmegen;UKGTN	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Short-rib thoracic dysplasia 8 with or without polydactyly, 615503;Short-rib thoracic dysplasia 8 with or without polydactyly;Jeune syndrome;SHORT-RIB POLYDACTYLY				25492405;23910462;29271569;26874042		False	3	50;0;50	4.19	False		ENSG00000126870	ENSG00000126870	HGNC:21862													
XPNPEP3	gene	XPNPEP3	Emory Genetics Laboratory;Expert Review Green;Illumina TruGenome Clinical Sequencing Services;NHS GMS;Orphanet;Radboud University Medical Center, Nijmegen	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	Nephronophthisis-like nephropathy 1 OMIM:613159;nephronophthisis-like nephropathy 1 MONDO:0013163				20179356;32660933		False	3	67;0;33	4.19	False		ENSG00000196236	ENSG00000196236	HGNC:28052													
ISCA-37405-Loss	region		Expert Review Green;ClinGen	Renal ciliopathies		Renal	BIALLELIC, autosomal or pseudoautosomal	609583;juvenile nephronophthisis 1: including growth retardation.  Joubert syndrome: multisystem disease characterized by cerebellar vermis hypoplasia with prominent superior cerebellar peduncles (resulting in the 'molar tooth sign,' or MTS, on axial MRI), mental retardation, hypotonia, irregular breathing pattern, and eye movement abnormalities;266900				8852662;9856524;15138899		False	3	0;0;0	4.19	False					2			110104531	110228181				30		60	cnv_loss	2q13 recurrent region (includes NPHP1) Loss
ISCA-37432-Loss	region		Expert Review Green;ClinGen	Renal ciliopathies		Renal	MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown	Schizophrenia;Mayer-Rokitansky-Kster-Hauser (MRKH) syndrome in females;delayed development, intellectual disability;614527;RCAD syndrome;utero-vaginal atresia;Chromosome 17q12 deletion syndrome;Autism Spectrum Disorder;global developmental delay;Renal cysts and diabetes syndrome						False	3	0;0;0	4.19	False					17			36458167	37854616				3		60	cnv_loss	17q12 recurrent (RCAD syndrome) region (includes HNF1B) Loss
