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Primary immunodeficiency or monogenic inflammatory bowel disease v2.529 RAC2 Arina Puzriakova changed review comment from: The mode of inheritance of this gene has been updated following NHS Genomic Medicine Service approval.; to: The mode of inheritance of this gene has been approved by the NHS Genomic Medicine Service.
Primary immunodeficiency or monogenic inflammatory bowel disease v2.529 RAC2 Arina Puzriakova Tag watchlist was removed from gene: RAC2.
Tag for-review was removed from gene: RAC2.
Primary immunodeficiency or monogenic inflammatory bowel disease v2.529 RAC2 Arina Puzriakova commented on gene: RAC2: The mode of inheritance of this gene has been updated following NHS Genomic Medicine Service approval.
Primary immunodeficiency or monogenic inflammatory bowel disease v2.529 RAC2 Arina Puzriakova commented on gene: RAC2: The rating of this gene has been updated following NHS Genomic Medicine Service approval.
Primary immunodeficiency or monogenic inflammatory bowel disease v2.528 RAC2 Arina Puzriakova Source Expert Review Green was added to RAC2.
Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Primary immunodeficiency or monogenic inflammatory bowel disease v2.355 RAC2 Arina Puzriakova Classified gene: RAC2 as Amber List (moderate evidence)
Primary immunodeficiency or monogenic inflammatory bowel disease v2.355 RAC2 Arina Puzriakova Added comment: Comment on list classification: Changed rating from Green to Amber so that Green genes on this panel reflect the NHS signed-off version. This will be reviewed at the next GMS panel update (added 'for-review' tag).
Primary immunodeficiency or monogenic inflammatory bowel disease v2.355 RAC2 Arina Puzriakova Gene: rac2 has been classified as Amber List (Moderate Evidence).
Primary immunodeficiency or monogenic inflammatory bowel disease v2.354 RAC2 Arina Puzriakova Tag for-review tag was added to gene: RAC2.
Primary immunodeficiency or monogenic inflammatory bowel disease v2.106 RAC2 Ivone Leong Classified gene: RAC2 as Green List (high evidence)
Primary immunodeficiency or monogenic inflammatory bowel disease v2.106 RAC2 Ivone Leong Added comment: Comment on list classification: Promoted from Amber to Green based on expert review (Zornitza Stark) and evidence.
Primary immunodeficiency or monogenic inflammatory bowel disease v2.106 RAC2 Ivone Leong Gene: rac2 has been classified as Green List (High Evidence).
Primary immunodeficiency or monogenic inflammatory bowel disease v2.105 RAC2 Ivone Leong Publications for gene: RAC2 were set to 21167572; 30654050; 30723080; 31071452; 25512081; 10758162; 31382036; 10961859
Primary immunodeficiency or monogenic inflammatory bowel disease v2.51 RAC2 Zornitza Stark edited their review of gene: RAC2: Changed phenotypes: SCID, recurrent bacterial and viral infections, lymphoproliferation, neutropaenia, reticular dysgenesis, deafness, selective IgA deficiency, Reduced Ab responses following vaccination, Neutrophil immunodeficiency syndrome, MIM# 608203, Common variable immunodeficiency
Primary immunodeficiency or monogenic inflammatory bowel disease v2.51 RAC2 Zornitza Stark reviewed gene: RAC2: Rating: GREEN; Mode of pathogenicity: None; Publications: 32198141, 31919089, 31382036, 31071452, 30723080, 30654050, 25512081; Phenotypes: SCID, recurrent bacterial and viral infections, lymphoproliferation, neutropaenia, reticular dysgenesis, deafness, selective IgA deficiency, Reduced Ab responses following vaccination; Mode of inheritance: BOTH monoallelic and biallelic, autosomal or pseudoautosomal; Current diagnostic: yes
Primary immunodeficiency or monogenic inflammatory bowel disease v2.36 RAC2 Louise Daugherty edited their review of gene: RAC2: Added comment: Added publication referenced by IUIS december 2019 update; Changed publications: 25512081, 30723080, 30654050, 31071452, 31382036
Primary immunodeficiency or monogenic inflammatory bowel disease v2.35 RAC2 Louise Daugherty Publications for gene RAC2 were updated from 10961859; 10758162; 21167572; 25512081 to 21167572; 30654050; 30723080; 31071452; 25512081; 10758162; 31382036; 10961859
Primary immunodeficiency or monogenic inflammatory bowel disease v2.30 RAC2 Louise Daugherty Phenotypes for gene: RAC2 were changed from T-B- SCID; T-B+ SCID; Neutrophil immunodeficiency syndrome 608203; Neutrophil immunodeficiency syndrome; RAS-related C3 Bolutinum toxin substrate 2 deficiency (RAC2); Poor wound healing, leukocytosis; Congenital defects of phagocyte number or function to T-B- SCID; T-B+ SCID; Neutrophil immunodeficiency syndrome 608203; Neutrophil immunodeficiency syndrome; RAS-related C3 Bolutinum toxin substrate 2 deficiency (RAC2); Poor wound healing, leukocytosis; Congenital defects of phagocyte number or function; Reticular dysgenesis; Recurrent sinopulmonary infections, selective IgA defiency; poststreptococcal glomerulonephritis; urticaria
Primary immunodeficiency or monogenic inflammatory bowel disease v2.28 RAC2 Louise Daugherty Added comment: Comment on mode of inheritance: changed MOI due to IUIS December 2019 update
Primary immunodeficiency or monogenic inflammatory bowel disease v2.28 RAC2 Louise Daugherty Mode of inheritance for gene: RAC2 was changed from MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown to BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Primary immunodeficiency or monogenic inflammatory bowel disease v2.27 RAC2 Louise Daugherty commented on gene: RAC2: Original Metadata from IUIS classification table (December, 2019). IUIS Genetic defect (original gene symbol in IUIS download): RAC2 .PanelApp HGNC gene symbol check: RAC2 . IUIS Disease: RAC2 deficiency . IUIS Inheritance: AD GOF / AR / AD LOF, T cells: Very low / no data, .B cells: Very low / no data, Immunoglobulin levels: Low / low, Neutrophil count: Low / High.IUIS Other affected cells: N. IUIS Associated features: Reticular dysgenesis / Recurrent sinopulmonary infections, selective IgA defiency; poststreptococcal glomerulonephritis; urticaria Poor wound healing, leukocytosis, IUIS Major category: TImmunodeficiencies affecting cellular and humoral immunity / Predominantly Antibody Deficiencies / Congenital defects of phagocyte number or function. IUIS Subcategory: T-B- SCID / CVID Phenotype/ Defects of Motility
Primary immunodeficiency or monogenic inflammatory bowel disease v1.21 RAC2 Louise Daugherty commented on gene: RAC2: Added watch list tag. Decided to leave the rating for this gene as Amber, this is borderline, as the Invitae reported variant would make a second case, there is not enough supporting evidence
Primary immunodeficiency or monogenic inflammatory bowel disease v1.21 RAC2 Louise Daugherty Tag watchlist tag was added to gene: RAC2.
Primary immunodeficiency or monogenic inflammatory bowel disease v1.19 RAC2 Louise Daugherty commented on gene: RAC2: Zornitza Stark (VCGS) , pers. comm. notes 2 families/functional evidence and rates the gene Green. However, there is only a single variant reported and confirmed in the literature NM_002872.4(RAC2):c.169G>A (p.Asp57Asn) that result in Neutrophil immunodeficiency syndrome. There is a second variant reported in clinvar by a Invitae, but although the phenotype is attributed to Neutrophil immunodeficiency syndrome, the affected status of the patient is described as 'unknown', so it was decided to keep this gene Amber until more robust evidence is published to support gene-disease relationship
Primary immunodeficiency or monogenic inflammatory bowel disease v1.19 RAC2 Louise Daugherty commented on gene: RAC2: PMID: 10961859 reported functional studies demonstrating that the D57N mutant behaves in a dominant-negative fashion at the cellular level.
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty marked gene: RAC2 as ready
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty commented on gene: RAC2
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty commented on gene: RAC2
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Sarah Leigh classified RAC2 as Amber List (moderate evidence)
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty commented on RAC2
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty commented on RAC2
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty commented on RAC2
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty reviewed RAC2
Primary immunodeficiency or monogenic inflammatory bowel disease RAC2 Louise Daugherty Added gene to panel