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Holoprosencephaly - NOT chromosomal v2.25 SMC1A Ivone Leong Tag for-review was removed from gene: SMC1A.
Holoprosencephaly - NOT chromosomal v2.25 SMC1A Sarah Leigh commented on gene: SMC1A
Holoprosencephaly - NOT chromosomal v2.24 SMC1A Ivone Leong Source Expert Review Green was added to SMC1A.
Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Holoprosencephaly - NOT chromosomal v2.12 SMC1A Arina Puzriakova Tag for-review tag was added to gene: SMC1A.
Holoprosencephaly - NOT chromosomal v2.12 SMC1A Arina Puzriakova Classified gene: SMC1A as Amber List (moderate evidence)
Holoprosencephaly - NOT chromosomal v2.12 SMC1A Arina Puzriakova Added comment: Comment on list classification: New gene added by external reviewer. At least 6 unrelated females with holoprosencephaly, mostly commonly semi-lobar type, associated with de novo variants in this gene (PMIDs: 28166369 and 31334757). Likely represents the severe end of the spectrum of SMC1A-related disorders.

Sufficient evidence to rate Green at the next GMS panel update (added 'for-review' tag)
Holoprosencephaly - NOT chromosomal v2.12 SMC1A Arina Puzriakova Gene: smc1a has been classified as Amber List (Moderate Evidence).
Holoprosencephaly - NOT chromosomal v2.11 SMC1A Arina Puzriakova Publications for gene: SMC1A were set to PMID: 31334757
Holoprosencephaly - NOT chromosomal v2.10 SMC1A Arina Puzriakova Phenotypes for gene: SMC1A were changed from holoprosencephaly; single central incisor to Developmental and epileptic encephalopathy 85, with midline brain defects, OMIM:301044; Developmental and epileptic encephalopathy, 85, with or without midline brain defects, MONDO:0026771
Holoprosencephaly - NOT chromosomal v2.5 SMC1A Shane Mckee gene: SMC1A was added
gene: SMC1A was added to Holoprosencephaly. Sources: Other
Mode of inheritance for gene: SMC1A was set to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Publications for gene: SMC1A were set to PMID: 31334757
Phenotypes for gene: SMC1A were set to holoprosencephaly; single central incisor
Penetrance for gene: SMC1A were set to Incomplete
Review for gene: SMC1A was set to GREEN
Added comment: Cohesin complex genes SMC1A, STAG4 etc need added to the panel; loss of function mutations in females (X-linked dominant)
Sources: Other