Autoinflammatory disorders

Gene: COPA

Green List (high evidence)

COPA (coatomer protein complex subunit alpha)
EnsemblGeneIds (GRCh38): ENSG00000122218
EnsemblGeneIds (GRCh37): ENSG00000122218
OMIM: 601924, Gene2Phenotype
COPA is in 3 panels

3 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown following NHS Genomic Medicine Service approval.
Created: 10 Dec 2025, 2:17 p.m. | Last Modified: 10 Dec 2025, 2:17 p.m.
Panel Version: 2.34

Dorota Rowczenio (Royal Free London NHS Trust)

Green List (high evidence)

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Autoimmune interstitial lung, joint, and kidney disease

Publications

  • PMID: 27048656
  • PMID: 31455335
  • PMID: 3976718
  • PMID: 34900872
  • PMID: 30385646
  • Jensson, B.O., Hansdottir, S., Arnadottir, G.A. et al. COPA syndrome in an Icelandic family caused by a recurrent missense mutation in COPA . BMC Med Genet 18, 129 (2017).

Arina Puzriakova (Genomics England Curator)

Green List (high evidence)

Comment on list classification: There is sufficient evidence to promote this gene to Green at the next GMS panel update.
Created: 8 May 2025, 11 a.m. | Last Modified: 8 May 2025, 11 a.m.
Panel Version: 2.5
Heterozygous variants in the COPA gene cause an autoinflammatory disorder that affects multiple organ systems. Affected individuals usually present in the first decade of life with variable features including interstitial lung disease with or without pulmonary hemorrhage, inflammatory arthritis, recurrent infections, and renal disease. Laboratory studies show evidence of systemic inflammation.

At least 9 unrelated families with more than 20 affected individuals have been reported in the literature (PMIDs: PMID: 25894502; 31455335; 38175705).

Variant hotspots include the WD40 domain and the C-terminal domain of the COPA protein.
Sources: Literature
Created: 8 May 2025, 11 a.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Phenotypes
{Autoinflammation and autoimmunity, systemic, with immune dysregulation}, OMIM:616414; COPA syndrome

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Literature
Phenotypes
  • {Autoinflammation and autoimmunity, systemic, with immune dysregulation}, OMIM:616414
  • COPA syndrome
OMIM
601924
Clinvar variants
Variants in COPA
Penetrance
None
Publications
Panels with this gene

History Filter Activity

10 Dec 2025, Gel status: 3

Removed Tag, Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ promote_green was removed from gene: COPA. Tag Q2_25_ NHS_review was removed from gene: COPA.

10 Dec 2025, Gel status: 3

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source NHS GMS was added to COPA. Source Expert Review Green was added to COPA. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

13 Jun 2025, Gel status: 2

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q2_25_ NHS_review tag was added to gene: COPA.

8 May 2025, Gel status: 2

Entity classified by Genomics England curator

Arina Puzriakova (Genomics England Curator)

Gene: copa has been classified as Amber List (Moderate Evidence).

8 May 2025, Gel status: 1

Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes

Arina Puzriakova (Genomics England Curator)

gene: COPA was added gene: COPA was added to Autoinflammatory disorders. Sources: Literature Q2_25_ promote_green tags were added to gene: COPA. Mode of inheritance for gene: COPA was set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown Publications for gene: COPA were set to 25894502; 31455335; 38175705 Phenotypes for gene: COPA were set to {Autoinflammation and autoimmunity, systemic, with immune dysregulation}, OMIM:616414; COPA syndrome Review for gene: COPA was set to GREEN