Mosaic brain disorders - deep sequencing
Gene: RPS6EnsemblGeneIds (GRCh38): ENSG00000137154
EnsemblGeneIds (GRCh37): ENSG00000137154
OMIM: 180460, Gene2Phenotype
RPS6 is in 0 panels
4 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to Red and the mode of inheritance set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown following NHS Genomic Medicine Service approval.Created: 11 Oct 2023, 8:53 a.m. | Last Modified: 11 Oct 2023, 8:53 a.m.
Panel Version: 0.133
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Tom Cullup (Great Ormond Street Hospital)
Either rate red or remove pleaseCreated: 31 May 2023, 9:33 a.m. | Last Modified: 31 May 2023, 9:33 a.m.
Panel Version: 0.100
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Hemimegalencephaly with intractable epilepsy
Publications
- PMID: 31411685
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Only a single patient has been reported to date who harboured a somatic mosaic missense VUS (c.695G > A; p.R232H) in the RPS6 gene. A concurrent somatic mosaic missense variant (c.6644C > T; p.S2215F) was identified in the MTOR gene. Authors speculated that it was this combination of variants affecting the mTOR pathway that contributed to the patients phenotype as demonstrated by a more severe phenotype in double mutant rats.
This gene is not associated with any phenotypes in OMIM, G2P or other PanelApp panels.
Recommending Red rating, awaiting further cases that would corroborate this association.Created: 22 Dec 2022, 12:12 p.m. | Last Modified: 22 Dec 2022, 12:12 p.m.
Panel Version: 0.62
Eleanor Williams (Genomics England Curator)
The rating of this gene has been updated to Red and the mode of inheritance set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown following NHS Genomic Medicine Service approval.Created: 1 Feb 2023, 5:26 p.m. | Last Modified: 1 Feb 2023, 5:38 p.m.
Panel Version: 0.93
Review submitted on behalf of Dr Lara Menzies, Dr Wendy Jones, Dr Amy McTague. Mode of inheritance: mosaic. Publications: Pelorusso et al 2019 Human Molecular Genetics. Mechanism: no information provided. Penetrance: no information provided.Created: 21 Dec 2022, 12:16 p.m. | Last Modified: 21 Dec 2022, 12:16 p.m.
Panel Version: 0.2
Phenotypes
Hemimegalencephaly with intractable epilepsy
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- NHS GMS
- Expert Review Red
- Expert list
- Phenotypes
-
- Hemimegalencephaly, severe intellectual disability, intractable seizures and hypochromic skin patches
- Tags
- OMIM
- 180460
- Clinvar variants
- Variants in RPS6
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
-
History Filter Activity
Added New Source
Sarah Leigh (Genomics England Curator)Source NHS GMS was added to RPS6.
Added Tag
Arina Puzriakova (Genomics England Curator)Tag watchlist tag was added to gene: RPS6.
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: rps6 has been classified as Red List (Low Evidence).
Added Tag
Arina Puzriakova (Genomics England Curator)Tag somatic tag was added to gene: RPS6.
Set mode of inheritance
Arina Puzriakova (Genomics England Curator)Mode of inheritance for gene: RPS6 was changed from to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: RPS6 were changed from to Hemimegalencephaly, severe intellectual disability, intractable seizures and hypochromic skin patches
Set mode of pathogenicity
Arina Puzriakova (Genomics England Curator)Mode of pathogenicity for gene: RPS6 was changed from to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: RPS6 were set to
Created, Added New Source, Set mode of inheritance
Eleanor Williams (Genomics England Curator)gene: RPS6 was added gene: RPS6 was added to Mosaic brain disorders. Sources: Expert list Mode of inheritance for gene: RPS6 was set to