Severe early-onset obesity

Gene: GNB1

Amber List (moderate evidence)

GNB1 (G protein subunit beta 1)
EnsemblGeneIds (GRCh38): ENSG00000078369
EnsemblGeneIds (GRCh37): ENSG00000078369
OMIM: 139380, Gene2Phenotype
GNB1 is in 8 panels

2 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

I don't know

PMID:38596856 reported three unrelated cases reported with either splicing or truncating variants in GNB1 gene and obesity. Although two of them were reported to start gain weight before 5 years of age, there were no information on their weight or BMI at onset. Hence, we cannot determine the severity of obesity at onset. The third case was reported to have obesity around 9 years of age.

This study also reviewed previously published cases, where two cases were reported with early-onset obesity (<5 years). However, complete information was not available to ascertain the severity.

As per the eligibility criteria on the National Genomic Test Directory (https://www.england.nhs.uk/wp-content/uploads/2018/08/rare-inherited-disease-eligibility-criteria-v8.0.pdf) the patients should have BMI more than 3 standard deviations above the mean, with onset before the age of 5 years. Hence, this gene should be rated amber with the current evidence.
Created: 9 May 2025, 3:18 p.m. | Last Modified: 9 May 2025, 3:19 p.m.
Panel Version: 5.3

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Obesity, HP:0001513

Publications

Dmitrijs Rots (Children's Clinical University Hospital)

Green List (high evidence)

75% of cases with truncating variants present with obesity as described in PMID: 38596856
Sources: Literature
Created: 12 Jan 2025, 10:37 a.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
PMID: 38596856

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
Phenotypes
  • Obesity, HP:0001513
OMIM
139380
Clinvar variants
Variants in GNB1
Penetrance
None
Publications
Panels with this gene

History Filter Activity

9 May 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: gnb1 has been classified as Amber List (Moderate Evidence).

9 May 2025, Gel status: 0

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: GNB1 were set to

9 May 2025, Gel status: 0

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: GNB1 were changed from PMID: 38596856 to Obesity, HP:0001513

12 Jan 2025, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set Phenotypes

Dmitrijs Rots (Children's Clinical University Hospital)

gene: GNB1 was added gene: GNB1 was added to Severe early-onset obesity. Sources: Literature Mode of inheritance for gene: GNB1 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Phenotypes for gene: GNB1 were set to PMID: 38596856 Review for gene: GNB1 was set to GREEN