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  2. Subcutaneous panniculitis T-cell lymphoma (SPTCL)
  3. HAVCR2
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Subcutaneous panniculitis T-cell lymphoma (SPTCL)

Gene: HAVCR2

Green List (high evidence)
HAVCR2 (hepatitis A virus cellular receptor 2)
EnsemblGeneIds (GRCh38): ENSG00000135077
EnsemblGeneIds (GRCh37): ENSG00000135077
OMIM: 606652, Gene2Phenotype
HAVCR2 is in 4 panels

1 review

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

Comment on phenotypes: This gene has been associated with relevant phenotypes in OMIM (MIM #618398) and the OMIM record was last accessed on 29 December 2025.
Created: 29 Dec 2025, 1:16 p.m. | Last Modified: 29 Dec 2025, 1:16 p.m.
Panel Version: 1.2
HAVCR2 has been added to the panel for R424 Subcutaneous panniculitis T-cell lymphoma (SPTCL) with a green rating as agreed with the NHS Genomic Medicine Service.
Created: 30 Jun 2023, 3:44 p.m. | Last Modified: 30 Jun 2023, 3:44 p.m.
Panel Version: 0.1

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Created: 30 Jun 2023, 3:44 p.m.
Last Modified: 30 Jun 2023, 3:44 p.m.
Panel version: 0.1

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • NHS GMS
  • Expert Review Green
Phenotypes
  • T-cell lymphoma, subcutaneous panniculitis-like, OMIM:618398
  • subcutaneous panniculitis-like T-cell lymphoma, MONDO:0019475
OMIM
606652
Clinvar variants
Variants in HAVCR2
Penetrance
None
Panels with this gene

History Filter Activity

29 Dec 2025, Gel status: 3

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: HAVCR2 were changed from to T-cell lymphoma, subcutaneous panniculitis-like, OMIM:618398; subcutaneous panniculitis-like T-cell lymphoma, MONDO:0019475

30 Jun 2023, Gel status: 3

Created, Added New Source, Set mode of inheritance

Achchuthan Shanmugasundram (Genomics England Curator)

gene: HAVCR2 was added gene: HAVCR2 was added to Subcutaneous panniculitis T-cell lymphoma (SPTCL). Sources: Expert Review Green,NHS GMS Mode of inheritance for gene: HAVCR2 was set to BIALLELIC, autosomal or pseudoautosomal