Cerebral vascular malformations

Gene: ITGB1

Amber List (moderate evidence)

ITGB1 (integrin subunit beta 1)
EnsemblGeneIds (GRCh38): ENSG00000150093
EnsemblGeneIds (GRCh37): ENSG00000150093
OMIM: 135630, Gene2Phenotype
ITGB1 is in 1 panel

2 reviews

Ida Ertmanska (Genomics England Curator)

I don't know

Comment on list classification: There are two patients reported in literature with Vein of Galen aneurysmal malformation and LoF variants in ITGB1 (presumed monoallelic but not specified). This gene should be rated Amber for Cerebral vascular malformations until more evidence is reported.
Created: 29 Oct 2025, 12:22 p.m. | Last Modified: 29 Oct 2025, 12:22 p.m.
Panel Version: 4.7
PMID: 37978175 Zhao et al., 2023
KVOGM89-1 and KVOGM105-1 patient exomes respectively contained the rare, damaging, variants p.Ser785fs (unphased) and c.2331-2 A>G (transmitted) in ITGB1 (Supplementary Fig. 4 and Supplementary Table 10). Both patients were males of European ancestry, who presented with intracranial haemorrhage, progressive macrocephaly, and shunt-dependent hydrocephalus - diagnosed with Vein of Galen malformation.

This gene is not yet associated with any conditions in OMIM (accessed 29th Oct 2025).
Created: 29 Oct 2025, 12:03 p.m. | Last Modified: 29 Oct 2025, 12:03 p.m.
Panel Version: 4.5

Mode of inheritance
Unknown

Phenotypes
Vein of Galen aneurysmal malformation, HP:0030713

Publications

Alexandra Njegic (Leeds Teaching Hospital Trust)

I don't know

37978175 (including PMID 30578106 cohort): combined 2 probands, 1 unphased frameshift and 1 transmitted splice variant, in silico modelling predicted NMD, pathogenicity given as 'likely damaging'.
Sources: Literature
Created: 15 Apr 2025, 9:10 a.m.

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Phenotypes
Vein of Galen Malformation

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
Phenotypes
  • Vein of Galen aneurysmal malformation, HP:0030713
OMIM
135630
Clinvar variants
Variants in ITGB1
Penetrance
Incomplete
Publications
Panels with this gene

History Filter Activity

29 Oct 2025, Gel status: 2

Set Phenotypes

Ida Ertmanska (Genomics England Curator)

Phenotypes for gene: ITGB1 were changed from Vein of Galen Malformation to Vein of Galen aneurysmal malformation, HP:0030713

29 Oct 2025, Gel status: 2

Entity classified by Genomics England curator

Ida Ertmanska (Genomics England Curator)

Gene: itgb1 has been classified as Amber List (Moderate Evidence).

15 Apr 2025, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

Alexandra Njegic (Leeds Teaching Hospital Trust)

gene: ITGB1 was added gene: ITGB1 was added to Cerebral vascular malformations. Sources: Literature Mode of inheritance for gene: ITGB1 was set to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown Publications for gene: ITGB1 were set to 37978175 Phenotypes for gene: ITGB1 were set to Vein of Galen Malformation Penetrance for gene: ITGB1 were set to Incomplete Review for gene: ITGB1 was set to AMBER