Description
Epilepsy Plus eligibility statement:

Epilepsy plus other features inclusion criteria (41928)
Established diagnosis of epilepsy, confirmed by a neurologist

AND with at least one additional phenotype from: intellectual disability, autism spectrum disorder, structural abnormality (e.g. dysmorphism, cerebral or somatic malformation), unexplained cognitive/memory decline

OR
Consanguineous parents

Epilepsy plus other features exclusion criteria (41928)
Case falls into one of the other GeL epilepsy disease categories
Focal, unilateral cerebral malformations

Prior genetic testing guidance (41928)
- Results should have been reviewed for all genetic tests undertaken, including disease-relevant genes in exome sequencing data. The patient is not eligible if they have a molecular diagnosis for their condition. 
- Genetic testing should continue according to routine local practice for this phenotype regardless of recruitment to the project; results of these tests must be submitted via the ‘Genetic investigations’ section of the data capture tool to allow comparison of WGS with current standard testing.  

PLEASE NOTE: The sensitivity of WGS compared to current diagnostic genetic testing has not yet been established. It is therefore important that tests which are clinically indicated under local standard practice continue to be carried out.

Epilepsy plus other features prior genetic testing genes (41928)
Testing of the following genes should be carried out PRIOR TO RECRUITMENT where this is in line with current local practice: 
As dictated by local practice and clinical phenotype including consideration of SCN1A

Closing statement (41928)
These requirements will be kept under continual review during the main programme and may be subject to change.

4 reviewers

  • Ellen McDonagh (Genomics England Curator)

    Group: other
    Workplace: other

  • Cristina Dias (The Francis Crick Institute)

    Group: NHS Genomic Medicine Centre
    Workplace: Other

  • Alice Gardham (Genomics England)

    Group: Other
    Workplace: Other

  • Louise Daugherty (Genomics England Curator)

    Group: Other
    Workplace: Other

142 genes

6 reviewed, 68 green

List Gene Reviews Mode of inheritance Details
142 genes
Green Green List (high evidence)
KIF1BP
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • UKGTN
Phenotypes
  • Goldberg-Shprintzen megacolon syndrome
Green Green List (high evidence)
NEXMIF
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Mental retardation, X-linked 98
Green Green List (high evidence)
ADSL
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Adenylosuccinase deficiency
Green Green List (high evidence)
ALG13
0 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • UKGTN
Phenotypes
  • Congenital disorder of glycosylation, type Is
  • Infantile spasms and LGS
Green Green List (high evidence)
ARHGEF9
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
Green Green List (high evidence)
ARX
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Green Green List (high evidence)
ATP1A3
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • UKGTN
  • Expert Review Green
Phenotypes
  • Alternating hemiplegia of childhood 2
  • Catastrophic epilepsy, unusual apnea spells, and postnatal microcephaly
  • Dystonia-12
  • CAPOS Syndrome (recurrent mutation)
Green Green List (high evidence)
ATRX
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Alpha-thalassemia/mental retardation syndrome
  • Mental retardation-hypotonic facies syndrome, X-linked
Green Green List (high evidence)
CDKL5
0 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Angelman syndrome-like
  • Epileptic encephalopathy, early infantile, 2
Green Green List (high evidence)
CHD2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Expert Review Green
  • Expert
Phenotypes
  • EPILEPTIC ENCEPHALOPATHY
Green Green List (high evidence)
CHRNA4
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Literature
  • Expert
  • UKGTN
  • Expert Review Green
Phenotypes
  • Epilepsy, nocturnal frontal lobe, 1
  • 600513
Green Green List (high evidence)
CNTNAP2
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
  • Expert
  • UKGTN
  • Expert Review Green
Phenotypes
  • Cortical Dysplasia-Focal Epilepsy Syndrome
  • Cortical dysplasia-focal epilepsy syndrome
  • Pitt-Hopkins like syndrome 1
Green Green List (high evidence)
DEPDC5
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epilepsy, familial focal, with variable foci
  • 604364
  • Epilepsy, familial focal, with variable foci
Green Green List (high evidence)
DNM1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Green Green List (high evidence)
DOCK7
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 23
  • EIEE23
Green Green List (high evidence)
DYRK1A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • MENTAL RETARDATION AUTOSOMAL DOMINANT TYPE 7
Green Green List (high evidence)
EHMT1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • UKGTN
  • Expert Review Green
Phenotypes
  • Kleefstra syndrome
Green Green List (high evidence)
FOXG1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Rett syndrome, congenital variant
Green Green List (high evidence)
GABRA1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • Expert Review Green
  • Expert list
Phenotypes
  • 611136
  • Epileptic encephalopathy, early infantile, 19
  • EPILEPTIC ENCEPHALOPATHY
Green Green List (high evidence)
GABRB3
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Radboud University Medical Center, Nijmegen
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Epilepsy, childhood absence, susceptibility to, 5
  • EPILEPTIC ENCEPHALOPATHIES
  • {Epilepsy,juvenilemyoclonic,susceptibilityto,8},607628{Epilepsy,juvenileabsence,susceptibilityto,2},607628{Epilepsy,idiopathicgeneralized,susceptibilityto,11},607628
Green Green List (high evidence)
GABRG2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert
  • Illumina TruGenome Clinical Sequencing Services
  • UKGTN
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epilepsy,generalized,withfebrileseizuresplus,type3
  • Febrile seizures, familial, 8
  • 611277
  • Generalized Epilepsy with Febrile Seizures Plus
  • Epilepsy, generalized, with febrile seizures plus, type 3
Green Green List (high evidence)
GNAO1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • EPILEPTIC ENCEPHALOPATHY
  • Epileptic encephalopathy, early infantile, 17
Green Green List (high evidence)
GRIN1
1 review
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant
  • NDHMSD
  • Neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive
  • NDHMSR
  • Mental retardation, autosomal dominant 8
  • early onset epileptic encephalopathies
  • involuntary movements
  • severe developmental delay
  • intellectual disability
  • EPILEPTIC ENCEPHALOPATHY
Green Green List (high evidence)
GRIN2A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Epilepsy, focal, with speech disorder and with or without mental retardation
  • EPILEPSY WITH NEURODEVELOPMENTAL DEFECTS
  • LANDAU-KLEFFNER SYNDROME
Green Green List (high evidence)
GRIN2B
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Mental retardation, autosomal dominant 6
  • Epileptic encephalopathy, early infantile, 27
  • EPILEPTIC ENCEPHALOPATHY
  • AUTISM
Green Green List (high evidence)
HCN1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review
  • Expert Review Green
Phenotypes
  • Epileptic encephalopathy, early infantile, 24
Green Green List (high evidence)
IQSEC2
0 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Mental retardation, X-linked 1
Green Green List (high evidence)
KCNA2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Epileptic encephalopathy, early infantile, 32
  • EPILEPTIC ENCEPHALOPATHY
Green Green List (high evidence)
KCNB1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Epileptic encephalopathy, early infantile, 26
Green Green List (high evidence)
KCNJ10
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • Expert Review Green
Phenotypes
  • SEIZURES-SENSORINEURAL DEAFNESS-ATAXIA-MENTAL RETARDATION-ELECTROLYTE IMBALANCE (SESAME)
  • SESAME syndrome
Green Green List (high evidence)
KCNQ2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Expert Review Green
Phenotypes
  • BENIGN NEONATAL EPILEPSY TYPE 1 (EBN1)
  • EPILEPTIC ENCEPHALOPATHY EARLY INFANTILE TYPE 7 (EIEE7)
  • Epileptic encephalopathy, early infantile, 7
  • Myokymia
  • Seizures, benign neonatal, 1
Green Green List (high evidence)
KCNQ3
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Benign Familial Neonatal Seizures
  • Seizures, benign neonatal, type 2
Green Green List (high evidence)
KCNT1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Expert Review Green
  • Literature
  • Expert
Phenotypes
  • 615005
  • Epileptic encephalopathy, early infantile, 14
  • Epilepsy, nocturnal frontal lobe, 5
  • MALIGNANT MIGRATING PARTIAL SEIZURES OF INFANCY
  • SEVERE AUTOSOMAL DOMINANT NOCTURNAL FRONTAL LOBE EPILEPSY
Green Green List (high evidence)
MAPK10
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Epileptic Encephalopathy
  • EPILEPTIC ENCEPHALOPATHY LENNOX-GASTAUT TYPE
Green Green List (high evidence)
MBD5
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • UKGTN
Phenotypes
  • Mental retardation, autosomal dominant 1
Green Green List (high evidence)
MECP2
0 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Encephalopathy, neonatal severe
  • Angelman syndrome
  • Mental retardation, X-linked syndromic, Lubs type
  • Mental retardation, X-linked, syndromic 13
  • Rett syndrome
Green Green List (high evidence)
MEF2C
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • UKGTN
  • Expert Review Green
Phenotypes
  • Mental retardation, autosomal dominant 20
  • MENTAL RETARDATION-STEREOTYPIC MOVEMENTS-EPILEPSY AND/OR CEREBRAL MALFORMATIONS
  • Mental retardation, stereotypic movements, epilepsy, and/or cerebral malformations
Green Green List (high evidence)
PCDH19
1 review
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert
  • Radboud University Medical Center, Nijmegen
  • UKGTN
  • Expert Review Green
  • Expert list
Phenotypes
  • 300088
  • Epileptic encephalopathy, early infantile, 9
Tags
  • x-linked-over-dominance
Green Green List (high evidence)
PIGA
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Multiple congenital anomalies-hypotonia-seizures syndrome 2
Green Green List (high evidence)
PLCB1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Early Infantile Epileptic Encephalopathy, Autosomal Recessive
  • Epileptic encephalopathy, early infantile, 12
Green Green List (high evidence)
PNKP
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
  • Emory Genetics Laboratory
Phenotypes
  • Early infantile epileptic encephalopathy type 10
  • Ataxia-oculomotor apraxia 4
  • Microcephaly, seizures, and developmental delay
Green Green List (high evidence)
POLG
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • UKGTN
  • Expert Review Green
  • Expert
Phenotypes
  • Mitochondrial DNA depletion syndrome 4A (Alpers type)
  • Mitochondrial DNA depletion syndrome 4B (MNGIE type)
  • Mitochondrial recessive ataxia syndrome (includes SANDO and SCAE)
Green Green List (high evidence)
PRRT2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Radboud University Medical Center, Nijmegen
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Convulsions, familial infantile, with paroxysmal choreoathetosis
  • Episodic kinesigenic dyskinesia 1
  • Seizures, benign familial infantile, 2
  • BENIGN FAMILIAL INFANTILE EPILEPSY AND INFANTILE CONVULSIONS WITH CHOREOATHETOSIS SYNDROME
Green Green List (high evidence)
PURA
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Mental retardation, autosomal dominant 31
  • INTELLECTUAL DISABILITY
Green Green List (high evidence)
QARS
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Microcephaly, progressive, seizures, and cerebral and cerebellar atrophy
Green Green List (high evidence)
SCN1A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • Literature
  • Eligibility statement exclusion criteria
  • Eligibility statement prior genetic testing
  • UKGTN
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epilepsy, generalized, with febrile seizures plus, type 2
  • Febrile seizures, familial, 3A
  • 604403
  • Generalized Epilepsy With Febrile Seizures Plus, Type 2
  • GEFSP2
  • 607208
  • Dravet syndrome
Green Green List (high evidence)
SCN1B
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Generalized Epilepsy with Febrile Seizures Plus
  • Epilepsy, generalized, with febrile seizures plus, type 1
  • Epilepsy, generalized, with febrile seizures plus, type 1
  • 604233
Green Green List (high evidence)
SCN2A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Illumina TruGenome Clinical Sequencing Services
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Benign Familial Neonatal Infantile Seizures
  • Early Infantile Epileptic Encephalopathy, Autosomal Dominant
  • Seizures, benign familial infantile, 3
  • Epileptic encephalopathy, early infantile, 11
  • BENIGN FAMILIAL NEONATAL INFANTILE SEIZURES
Green Green List (high evidence)
SCN8A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
  • Expert Review Green
  • UKGTN
Phenotypes
  • Cognitive impairment with or without cerebellar ataxia
  • Intellectual disability
  • Epileptic encephalopathy, early infantile, 13
Green Green List (high evidence)
SETD5
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Mental retardation, autosomal dominant 23
Green Green List (high evidence)
SIK1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • NEONATAL EPILEPSY SPECTRUM
  • Epileptic encephalopathy, early infantile, 30
Green Green List (high evidence)
SLC12A5
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • epilepsy of infancy with migrating focal seizures (EIMFS)
Green Green List (high evidence)
SLC13A5
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Phenotypes
  • Epileptic encephalopathy, early infantile, 25
Green Green List (high evidence)
SLC16A2
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • UKGTN
Phenotypes
  • Allan-Herndon-Dudley syndrome
Green Green List (high evidence)
SLC25A22
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Epileptic encephalopathy, early infantile, 3
Green Green List (high evidence)
SLC2A1
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • UKGTN
  • Expert Review Green
  • Radboud University Medical Center, Nijmegen
  • Expert
Phenotypes
  • {Epilepsy,idiopathicgeneralized,suscpetibilityto,12}
  • 614847
  • 606777
  • 612126
  • Dystonia 9
Green Green List (high evidence)
SLC6A1
0 reviews
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Green Green List (high evidence)
SLC9A6
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • UKGTN
  • Expert Review Green
Phenotypes
  • Mental retardation, X-linked syndromic, Christianson type
Green Green List (high evidence)
SPTAN1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Epileptic encephalopathy, early infantile, 5
Green Green List (high evidence)
STX1B
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert Review
Green Green List (high evidence)
STXBP1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Illumina TruGenome Clinical Sequencing Services
  • UKGTN
  • Expert Review Green
  • Expert
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epileptic encephalopathy, early infantile, 4
Green Green List (high evidence)
SYNGAP1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Mental retardation, autosomal dominant 5
Green Green List (high evidence)
TCF4
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • UKGTN
  • Expert Review Green
  • Expert
Phenotypes
  • Pitt-Hopkins syndrome
Green Green List (high evidence)
UBE2A
0 reviews
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert Review Green
  • UKGTN
Phenotypes
  • Mental retardation, X-linked syndromic, Nascimento-type
Green Green List (high evidence)
UBE3A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, paternally imprinted (maternal allele expressed)
Sources
  • Expert Review Green
  • Expert
  • UKGTN
Phenotypes
  • Angelman syndrome
Green Green List (high evidence)
WDR45
0 reviews
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • Expert Review
Green Green List (high evidence)
WWOX
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Expert Review
Green Green List (high evidence)
ZEB2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • UKGTN
  • Expert Review Green
Phenotypes
  • Mowat-Wilson syndrome
Red Red List (low evidence)
ABAT
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
  • Literature
Phenotypes
  • GABA-transaminase deficiency
Red Red List (low evidence)
ADGRV1
0 reviews
Not set
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Febrile seizures, familial, 4, 604352Usher syndrome, type 2C, 605472Usher syndrome, type 2C, GPR98/PDZD7 digenic, 605472
Red Red List (low evidence)
ALDH7A1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
ATP1A2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
BTD
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CACNA1A
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CACNA1H
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CACNB4
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • {Epilepsy, juvenile myoclonic, susceptibility to, 6}, 607682{Epilepsy, idiopathic generalized, susceptibility to, 9}, 607682Episodic ataxia, type 5, 613855
Red Red List (low evidence)
CASK
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CASR
0 reviews
Not set
Sources
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Hypocalciuric hypercalcemia, type I, 145980Hyperparathyroidism, neonatal, 239200Hypocalcemia, autosomal dominant, 601198Hypocalcemia, autosomal dominant, with Bartter syndrome, 601198{Epilepsy idiopathic generalized, susceptibility to, 8}, 612899Hypercalciuric hypercalcemia{Calcium, serum level of}
Red Red List (low evidence)
CBL
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
CHRNA2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert
  • Expert Review Red
  • Literature
Phenotypes
  • 610353
  • Epilepsy, nocturnal frontal lobe, type 4
Red Red List (low evidence)
CHRNB2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Literature
  • Expert Review Red
  • Expert
  • UKGTN
Phenotypes
  • Epilepsy, nocturnal frontal lobe, 3
  • 605375
Red Red List (low evidence)
CLN3
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CLN5
0 reviews
Not set
Sources
  • Expert
  • Expert Review Red
Red Red List (low evidence)
CLN6
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CLN8
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CNTN2
0 reviews
Not set
Sources
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epilepsy, familial adult myoclonic, 5
Red Red List (low evidence)
COL4A1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
COL4A2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CPA6
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Illumina TruGenome Clinical Sequencing Services
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Familial Temporal Lobe Epilepsy
  • Febrile seizures, familial, 11
  • Epilepsy, familial temporal lobe, 5
Red Red List (low evidence)
CRH
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
CSNK1G1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
CSTB
1 review
Not set
Sources
  • Expert Review Red
  • Expert
Tags
  • nucleotide-repeat-expansion
Red Red List (low evidence)
CTSD
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
EEF1A2
0 reviews
Not set
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Red Red List (low evidence)
EFHC1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
EPM2A
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
FTL
0 reviews
Not set
Sources
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epilepsy, familial temporal lobe, 2 (2)
Red Red List (low evidence)
GABBR2
0 reviews
Not set
Sources
  • Expert Review
  • Expert Review Red
Red Red List (low evidence)
GABRD
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
GAMT
0 reviews
Not set
Sources
  • Expert
  • Expert Review Red
Red Red List (low evidence)
GATAD2B
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
GATM
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
GLRA1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
GLRB
0 reviews
Not set
Sources
  • Expert
  • Expert Review Red
Red Red List (low evidence)
GOSR2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
GPHN
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
HLCS
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
HNRNPU
0 reviews
Not set
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epileptic encephalopathy (Mefford (2011) Ann Neurol 70, 974)
Red Red List (low evidence)
KCNA1
0 reviews
Not set
Sources
  • Expert
  • Expert Review Red
Red Red List (low evidence)
KCNC1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
KCNMA1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Generalized Epilepsy and Paroxysmal Dyskinesia
Red Red List (low evidence)
KCTD7
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
LGI1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • UKGTN
  • Radboud University Medical Center, Nijmegen
  • Expert Review Red
  • Expert
Phenotypes
  • Epilepsy, familial temporal lobe, 1
Red Red List (low evidence)
MAGI2
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • UKGTN
Phenotypes
  • Infantile Spasms
Red Red List (low evidence)
MFSD8
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
MOCS1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
MOCS2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
MT-TL1
0 reviews
MITOCHONDRIAL
Sources
  • UKGTN
  • Expert Review Red
Red Red List (low evidence)
NECAP1
0 reviews
Not set
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • ?Epileptic encephalopathy, early infantile,21
Red Red List (low evidence)
NEDD4L
0 reviews
Not set
Sources
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • pilepsy,photosensitivegeneralized(Dibbens(2007)GenesBrainBehav6,750)
Red Red List (low evidence)
NHLRC1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
NRXN1
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • UKGTN
  • Expert Review Red
Red Red List (low evidence)
PCDH12
2 reviews
1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • intellectual disability
  • microcephaly
  • epilepsy
  • perithalamic hyperechogenicity
  • periventricular hyperechogenicity
  • midbrain abnormalities
  • hypothalamic abnormalities
Tags
  • founder-effect
Red Red List (low evidence)
PIGQ
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
PNPO
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
PPT1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
PRICKLE1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
PRICKLE2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
RYR3
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
SCARB2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
SCN2B
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
SCN9A
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Familial Febrile Seizures
  • Epilepsy, generalized, with febrile seizures plus, type 7
  • Febrile seizures, familial, 3B
  • Familial Febrile Seizures
  • Generalized Epilepsy with Febrile Seizures Plus
Red Red List (low evidence)
SLC6A5
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
SLC6A8
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
SMS
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
SRPX2
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
ST3GAL3
0 reviews
Not set
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epileptic encephalopathy, early infantile, 15
Red Red List (low evidence)
SZT2
0 reviews
Not set
Sources
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Epileptic encephalopathy, early infantile, 18
Red Red List (low evidence)
TBC1D24
0 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert
  • UKGTN
  • Expert Review Red
  • Radboud University Medical Center, Nijmegen
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Familial Infantile Myoclonic Epilepsy
Red Red List (low evidence)
TBL1XR1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert Review
Red Red List (low evidence)
TPP1
0 reviews
Not set
Sources
  • Expert Review Red
  • Expert
Red Red List (low evidence)
TSC1
0 reviews
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Red
  • Illumina TruGenome Clinical Sequencing Services
Phenotypes
  • Focal Cortical Dysplasia of Taylor

0 STRs

0 reviewed, 0 green

List STR Reviews Mode of inheritance Details
0 STRss

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