Congenital muscular dystrophy
Gene: POGLUT1EnsemblGeneIds (GRCh38): ENSG00000163389
EnsemblGeneIds (GRCh37): ENSG00000163389
OMIM: 615618, Gene2Phenotype
POGLUT1 is in 4 panels
5 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.Created: 26 Sep 2024, 1:47 p.m. | Last Modified: 26 Sep 2024, 1:47 p.m.
Panel Version: 4.28
Associated with relevant phenotype in OMIM, but not associated with phenotype in Gen2Phen. PMID: 31897643 reports seven POGLUT1 variants in six families with Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232. Supportive in vitro and in vivo functional studies were presented in PMID: 31897643.Created: 15 Dec 2022, 5:43 p.m. | Last Modified: 15 Dec 2022, 5:43 p.m.
Panel Version: 3.17
Comment on list classification: There is enough evidence for this gene to be rated GREEN at the next major review.Created: 15 Dec 2022, 5:26 p.m. | Last Modified: 15 Dec 2022, 5:26 p.m.
Panel Version: 3.15
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Anna Sarkozy (Great Ormond Street Hospital)
in addition to adult-onset LGMD R21 (OMIM# 617232), biallelic variants in POGLUT1 gene have been reported in one patient with congenital muscular dystrophy and in two further patients with onset before 3 years of age. The presenting symptom were hypotonia with lower limb proximal weakness after gait acquisition, and further progression with mild weakness, wasting and contractures of the upper limbs, mild facial weakness, ptosis, and nasal voice. weakness was more severe and had faster progression compared to later onset patients. Muscle biopsies show evidence of α-dystroglycan hypoglycosylation. POGLUT1 activity is critical for the Notch signalling pathway, as JAG2. In view of these evidences, this gene should be considered green for CMD panel as well, in addition to LGMD panel.Created: 10 Nov 2022, 4:02 p.m. | Last Modified: 10 Nov 2022, 4:02 p.m.
Panel Version: 2.31
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
muscular dystrophy, secondary alpha-dystroglycanopathy
Publications
Mode of pathogenicity
Other
Ivone Leong (Genomics England Curator)
Comment on list classification: Promoted from red to amber. POGLUT1 may be associated with LGMD on OMIM but not associated with any phenotype in Gene2Phenotype. PMID: 27807076 reported on a family (Spanish descent) of 4 affected siblings with recessive limb-girdle muscular dystrophy 21 born from consanguineous parents. All affected siblings were homozygous for a missense variant in POGLUT1. The same study also reported on a Drosophila model where the variant affected muscle development. There is currently not enough evidence to support a gene-disease assocation (only 1 reported case and 1 animal model), therefore POGLUT1 has been given amber gene rating until further evidence is available where the gene status can be re-evaluated.
However, this gene may be more appropriate in the LGMD panel (code: 185) instead of this one.Created: 7 Aug 2019, 9:06 a.m. | Last Modified: 7 Aug 2019, 9:45 a.m.
Panel Version: 1.55
Louise Daugherty (Genomics England Curator)
Initial gene list (Congenital Muscular Dystrophy Gene Panel 207-London South GLH.xlsx) collated by Rachael Mein, Viapath Guy's Hospital February 2019 on behalf of London South GLH for the GMS Neurology specialist test group.Created: 29 Apr 2019, 3:37 p.m.
Rachael Mein (Viapath at Guy's Hospital)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
?Muscular dystrophy, limb-girdle, autosomal recessive 21, 617232
Publications
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- London South GLH
- Phenotypes
-
- Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232
- autosomal recessive limb-girdle muscular dystrophy type 2R1, MONDO:0014977
- OMIM
- 615618
- Clinvar variants
- Variants in POGLUT1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag currently-not-available-via-GLH-non-WGS-testing was removed from gene: POGLUT1.
Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag currently-not-available-via-GLH-non-WGS-testing tag was added to gene: POGLUT1.
Removed Tag, Removed Tag
Sarah Leigh (Genomics England Curator)Tag Q4_22_promote_green was removed from gene: POGLUT1. Tag Q4_22_NHS_review was removed from gene: POGLUT1.
Added New Source, Status Update
Sarah Leigh (Genomics England Curator)Source Expert Review Green was added to POGLUT1. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag
Eleanor Williams (Genomics England Curator)Tag Q4_22_NHS_review tag was added to gene: POGLUT1.
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: POGLUT1 were changed from Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232 to Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232; autosomal recessive limb-girdle muscular dystrophy type 2R1, MONDO:0014977
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: POGLUT1 were set to 27807076; 31897643
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: POGLUT1 were changed from Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232; autosomal recessive limb-girdle muscular dystrophy type 2R1, MONDO:0014977 to Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232
Removed Tag, Added Tag
Sarah Leigh (Genomics England Curator)Tag watchlist was removed from gene: POGLUT1. Tag Q4_22_promote_green tag was added to gene: POGLUT1.
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: POGLUT1 were set to 27807076; 33861953
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: POGLUT1 were changed from ?Muscular dystrophy, limb-girdle, autosomal recessive 21, 617232 to Muscular dystrophy, limb-girdle, autosomal recessive 21, OMIM:617232; autosomal recessive limb-girdle muscular dystrophy type 2R1, MONDO:0014977
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: poglut1 has been classified as Amber List (Moderate Evidence).
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: POGLUT1 were set to 27807076
Added Tag
Ivone Leong (Genomics England Curator)Tag watchlist tag was added to gene: POGLUT1.
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: poglut1 has been classified as Amber List (Moderate Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: POGLUT1 were set to
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: POGLUT1 were changed from to ?Muscular dystrophy, limb-girdle, autosomal recessive 21, 617232
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: POGLUT1 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to POGLUT1.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: POGLUT1 was added gene: POGLUT1 was added to Congenital muscular dystrophy. Sources: London South GLH Mode of inheritance for gene: POGLUT1 was set to