Palmoplantar keratoderma and erythrokeratodermas
Gene: KRT6BEnsemblGeneIds (GRCh38): ENSG00000185479
EnsemblGeneIds (GRCh37): ENSG00000185479
OMIM: 148042, Gene2Phenotype
KRT6B is in 2 panels
2 reviews
Rebecca Foulger (Genomics England curator)
Comment when marking as ready: 1 Green review plus KRT6B is listed in the 'Eligibility statement, Prior Genetic Testing'. 3 cases (from 2 papers) based on 1 variant linking KRT6B to Pachyonychia congenita.Created: 10 Jan 2017, 5:10 p.m.
Comment on list classification: Updated rating from Amber to Green: One green review plus KRT6B is included in the Eligibility statement 'Prior Genetic Testing' list. 1 Variant listed in OMIM for 3 families. Not yet a confirmed DD gene.Created: 9 Jan 2017, 12:12 p.m.
In 2 families (families 29 and 30) segregating pachyonychia congenita, Smith et al. (2005, PMID:16250206) identified heterozygosity for the same E472K mutation in the KRT6B gene that had been identified in a Dutch family in their earlier paper (Smith et al.,1998, PMID:9618173). Haplotype analysis showed that family 29 had an independent occurrence of the mutation; haplotype analysis was not possible in family 30 because of lack of samples, but the family was not of Dutch ancestry.Created: 5 Jan 2017, 4:44 p.m.
In a family with autosomal dominant pachyonychia congenita (PC4; 615728), Smith et al. (PMID:9618173, 1998) described a heterozygous 1459G-A mutation in KRT6B that predicted a glu472-to-lys (E472K) substitution. The clinical features pictured included focal palmoplantar keratoderma.Created: 5 Jan 2017, 4:43 p.m.
Comment on publications: PMID:9618173 (Smith et al., 1998) reports that a mutation in KRT6B produces a phenocopy of the K17 disorder pachyonychia congenita type 2 (PC-2).Created: 5 Jan 2017, 4:35 p.m.
Comment on mode of inheritance: Mode of inheritance confirmed by OMIM.Created: 5 Jan 2017, 4:30 p.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Radboud University Medical Center, Nijmegen
- UKGTN
- Eligibility statement prior genetic testing
- Phenotypes
-
- Pachyonychia congenita 4, 615728
- PC4
- pachyonychia congenita type 2 (PC-2)
- OMIM
- 148042
- Clinvar variants
- Variants in KRT6B
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
panel promoted to version 1
Rebecca Foulger (Genomics England curator)Promoted to Version 1, April 11th 2017: Reviews were assessed, and panel was revised according to expert review and additional curation.
Gene classified by Genomics England curator
Rebecca Foulger (Genomics England curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Rebecca Foulger (Genomics England curator)This gene has been classified as Green List (High Evidence).
Set publications
Rebecca Foulger (Genomics England curator)Publications for KRT6B were set to 9618173; 16250204
Set publications
Rebecca Foulger (Genomics England curator)Publications for KRT6B were set to 9618173; 16250204
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for KRT6B were set to Pachyonychia congenita 4, 615728; PC4; pachyonychia congenita type 2 (PC-2)
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for KRT6B were set to Pachyonychia congenita 4, 615728; PC4; pachyonychia congenita type 2
Set Mode of Inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for KRT6B was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for KRT6B were set to Pachyonychia congenita 4, 615728; PC4
Added New Source
Ellen McDonagh (Genomics England Curator)KRT6B was added to Palmoplantar keratoderma and erythrokeratodermaspanel. Source: Radboud University Medical Center, Nijmegen
Added New Source
Ellen McDonagh (Genomics England Curator)KRT6B was added to Palmoplantar keratoderma and erythrokeratodermaspanel. Source: UKGTN
Created
Ellen McDonagh (Genomics England Curator)KRT6B was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)KRT6B was added to Palmoplantar keratoderma and erythrokeratodermaspanel. Sources: Eligibility statement prior genetic testing