Palmoplantar keratoderma and erythrokeratodermas
Gene: TRPV3EnsemblGeneIds (GRCh38): ENSG00000167723
EnsemblGeneIds (GRCh37): ENSG00000167723
OMIM: 607066, Gene2Phenotype
TRPV3 is in 8 panels
2 reviews
Veronica Kinsler (UCL)
Rebecca Foulger (Genomics England curator)
Comment when marking as ready: Sufficient cases to support causation. Mode of inheritance supported by OMIM and G2P.Created: 13 Mar 2017, 10:16 a.m.
Comment on list classification: Updated rating from Amber to Green: 1 Green expert review plus at least 3 unrelated cases (from China and India) supporting causation for Olmsted Syndrome (which presents with PPK) from OMIM and additional literature. Plus one family reported for Palmoplantar keratoderma, nonepidermolytic, focal 2 (MIM:616400).Created: 13 Mar 2017, 10:16 a.m.
>3 TRPV3 variants listed in OMIM for Olmsted syndrome (OMIM:614594; also known as mutilating palmoplantar keratoderma with periorificial keratotic plaques). This includes 6 Chinese patients with OMIM:614594 identified by Lin et al., 2012 (PMID: 22405088), and a girl of unspecified ethnicity (PMID:24452206, Duchatelet et al., 2014). It's not specified whether the Chinese patients in Lin et al, are related or not.Created: 13 Mar 2017, 9:36 a.m.
TRPV3 is a PROBABLE DD gene for Olmsted syndrome (OMIM:614594).Created: 13 Mar 2017, 9:16 a.m.
PMID:25989441 (Agarwala, 2016) present a 28 year old Indian male with Olmsted syndrome and thickening of palmar and plantar skin (diffuse PPK). They detected four heterozygous variants in TRPV3. Only one of these was unique to the affected proband: c.1246Ins6 (a 6 nucleotide insertion) appears to be a de novo change that is only expressed in the proband's DNA. Other heterozygous changes are present in the unaffected parents and sister.Created: 10 Jan 2017, 3:05 p.m.
Comment on mode of inheritance: Mode of inheritance confirmed by OMIM (for both OMIM:614594 and OMIM:616400) and G2P (for Olmsted syndrome, OMIM:614594).Created: 9 Jan 2017, 9:55 a.m.
1 TRPV3 variant listed in OMIM for 'Palmoplantar keratoderma, nonepidermolytic, focal 2 (OMIM:616400)' for 1 family (also a Chinese family- a father and son with focal palmoplantar keratoderma). The mutation (a T-G transversion resulting in a Q580P substitution) occurred de novo in the father; it was not detected in the unaffected paternal grandparents, an unaffected paternal uncle, or an unaffected sister. Transfection studies suggest that Q580P is a gain-of-function change.Created: 9 Jan 2017, 9:52 a.m.
Comment on mode of pathogenicity: The T-G transversion (rs786205869) resulting in a Q580P substitution in a Chinese father and son (PMID:25285920, He et al., 2015) is a gain-of-function change.Created: 9 Jan 2017, 9:52 a.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- Other
- Radboud University Medical Center, Nijmegen
- Illumina TruGenome Clinical Sequencing Services
- Phenotypes
-
- Olmsted syndrome, 614594
- Palmoplantar Keratoderma, Mutilating, with Periorificial Keratotic Plaques
- ?Palmoplantar keratoderma, nonepidermolytic, focal 2, 616400
- OMIM
- 607066
- Clinvar variants
- Variants in TRPV3
- Penetrance
- Complete
- Publications
- Mode of Pathogenicity
- Other - please provide details in the comments
- Panels with this gene
History Filter Activity
panel promoted to version 1
Rebecca Foulger (Genomics England curator)Promoted to Version 1, April 11th 2017: Reviews were assessed, and panel was revised according to expert review and additional curation.
Gene classified by Genomics England curator
Rebecca Foulger (Genomics England curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Rebecca Foulger (Genomics England curator)This gene has been classified as Green List (High Evidence).
Set Mode of Inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for TRPV3 was changed to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Set Mode of Inheritance
Rebecca Foulger (Genomics England curator)Mode of inheritance for TRPV3 was changed to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Set mode of pathogenicity
Rebecca Foulger (Genomics England curator)Mode of pathogenicity for TRPV3 was changed to Other - please provide details in the comments
Upload gene information
Rebecca Foulger (Genomics England curator)TRPV3 was added to Palmoplantar keratoderma and erythrokeratodermaspanel. Sources: Other
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene TRPV3 were set to Olmsted syndrome, 614594; Palmoplantar Keratoderma, Mutilating, with Periorificial Keratotic Plaques; ?Palmoplantar keratoderma, nonepidermolytic, focal 2, 616400
Upload gene information
Rebecca Foulger (Genomics England curator)TRPV3 was added to Palmoplantar keratoderma and erythrokeratodermaspanel. Sources: Radboud University Medical Center, Nijmegen
Set Phenotypes
Rebecca Foulger (Genomics England curator)Phenotypes for gene TRPV3 were set to Palmoplantar Keratoderma, Mutilating, with Periorificial Keratotic Plaques; ?Palmoplantar keratoderma, nonepidermolytic, focal 2, 616400
Created
Ellen McDonagh (Genomics England Curator)TRPV3 was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)TRPV3 was added to Palmoplantar keratoderma and erythrokeratodermaspanel. Sources: Illumina TruGenome Clinical Sequencing Services