Congenital myopathy

Gene: TNNC2

Green List (high evidence)

TNNC2 (troponin C2, fast skeletal type)
EnsemblGeneIds (GRCh38): ENSG00000101470
EnsemblGeneIds (GRCh37): ENSG00000101470
OMIM: 191039, Gene2Phenotype
TNNC2 is in 1 panel

7 reviews

Eleanor Williams (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green following NHS Genomic Medicine Service approval.
Created: 1 Feb 2023, 5:10 p.m. | Last Modified: 1 Feb 2023, 5:10 p.m.
Panel Version: 3.14

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

Not associated with a phenotype in OMIM, Gen2Phen or MONDO. PMID: 33755597 reports two variants each in unrelated cases. The variant c.100G>T; p.Asp34Tyr segregates dominantly with congenital myopathy in three generations of Family 1, while c.237G>C; p.Met79Ile appear to be de novo in family 2. Detailed functional evidence is also presented in PMID: 33755597.
Created: 13 Dec 2022, 3:31 p.m. | Last Modified: 13 Dec 2022, 3:31 p.m.
Panel Version: 3.10

Anna Sarkozy (Great Ormond Street Hospital)

Green List (high evidence)

4 patients from 2 unrelated families described to date with mono-allelic variants in TNNC2 gene, presenting with a distinct, dominantly inherited congenital muscle disease. the clinical features are in keeping with a congenital myopathy with polyhydramnios during gestation, weakness, severe neonatal respiratory muscle involvement and external ophthalmoparesis. Feeding difficulties and scoliosis was also reported. muscle biopsy was myopathic with variation of fibre size and incrase in type 1 fibres. Functional data supports role of the changes, that are considered disrupting the binding sites for Ca2+ and troponin. overall, this evidence supports the upgrade to GREEN.
Created: 10 Nov 2022, 2:49 p.m. | Last Modified: 10 Nov 2022, 2:49 p.m.
Panel Version: 2.93

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
congenital myopathy

Mode of pathogenicity
Other

Ivone Leong (Genomics England Curator)

Comment on list classification: Promoted from Red to Amber. This gene is currently not associated with a phenotype in OMIM or Gene2Phenotype. There is enough evidence to support a gene-disease association. This gene should be rated Green at the next review.
Created: 12 Jul 2021, 9:24 a.m. | Last Modified: 12 Jul 2021, 9:24 a.m.
Panel Version: 2.51
Comment on publications: PMID:26924529 was incorrectly entered for TNNC2
Created: 12 Jul 2021, 8:59 a.m. | Last Modified: 12 Jul 2021, 8:59 a.m.
Panel Version: 2.49

Dmitrijs Rots (Children's Clinical University Hospital)

Green List (high evidence)

Two families with congenital myopathy and dominantly inherited TNNC2 variants and details functional analysis reported in PMID: 33755597.
Created: 22 Jun 2021, 1:35 p.m. | Last Modified: 22 Jun 2021, 1:35 p.m.
Panel Version: 2.28

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Myopathy

Publications

Mode of pathogenicity
Other

Louise Daugherty (Genomics England Curator)

I don't know

Note : The review uploaded on behalf of Rachael Mein (Viapath at Guy's Hospital) publication PMID: 26924529 is incorrect. The original file from London South GLH correctly associates PMID: 23746549 to the gene TRIP4, but for TNNC2 the publication field was blank (no data was supplied as evidence). The Green review rating for TNNC2 is the rating given by London South GLH. There is currently not enough evidence to support a Amber rating.
Created: 17 Oct 2019, 2:44 p.m. | Last Modified: 17 Oct 2019, 2:44 p.m.
Panel Version: 1.182
Gene rating and review submitted by Rachael Mein, Viapath Guy's Hospital February 2019 on on behalf of London South GLH for the GMS Neurology specialist test group.
Created: 30 Apr 2019, 10:09 a.m.

Rachael Mein (Viapath at Guy's Hospital)

I don't know

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

Phenotypes
congenital myopathy

Publications

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • London South GLH
Phenotypes
  • Myopathy, congenital, with neonatal respiratory insufficiency, OMIM:620161
OMIM
191039
Clinvar variants
Variants in TNNC2
Penetrance
None
Publications
Panels with this gene

History Filter Activity

6 Feb 2023, Gel status: 3

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: TNNC2 were changed from congenital myopathy, MONDO:0019952 to Myopathy, congenital, with neonatal respiratory insufficiency, OMIM:620161

1 Feb 2023, Gel status: 3

Removed Tag

Eleanor Williams (Genomics England Curator)

Tag Q3_21_rating was removed from gene: TNNC2.

1 Feb 2023, Gel status: 3

Added New Source, Status Update

Eleanor Williams (Genomics England Curator)

Source Expert Review Green was added to TNNC2. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

12 Jul 2021, Gel status: 2

Added Tag

Ivone Leong (Genomics England Curator)

Tag Q3_21_rating tag was added to gene: TNNC2.

12 Jul 2021, Gel status: 2

Entity classified by Genomics England curator

Ivone Leong (Genomics England Curator)

Gene: tnnc2 has been classified as Amber List (Moderate Evidence).

12 Jul 2021, Gel status: 1

Set Phenotypes

Ivone Leong (Genomics England Curator)

Phenotypes for gene: TNNC2 were changed from congenital myopathy to congenital myopathy, MONDO:0019952

12 Jul 2021, Gel status: 1

Set publications

Ivone Leong (Genomics England Curator)

Publications for gene: TNNC2 were set to 26924529

3 May 2019, Gel status: 1

Set Phenotypes

Louise Daugherty (Genomics England Curator)

Phenotypes for gene: TNNC2 were changed from severe congenital myopathy with congenital bone fractures, 616866 to congenital myopathy

30 Apr 2019, Gel status: 1

Set publications

Louise Daugherty (Genomics England Curator)

Publications for gene: TNNC2 were set to

30 Apr 2019, Gel status: 1

Set Phenotypes

Louise Daugherty (Genomics England Curator)

Phenotypes for gene: TNNC2 were changed from to severe congenital myopathy with congenital bone fractures, 616866

30 Apr 2019, Gel status: 1

Set mode of inheritance

Louise Daugherty (Genomics England Curator)

Mode of inheritance for gene: TNNC2 was changed from to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown

30 Apr 2019, Gel status: 1

Added New Source

Louise Daugherty (Genomics England Curator)

Source NHS GMS was added to TNNC2.

30 Apr 2019, Gel status: 1

Created, Added New Source, Set mode of inheritance

Louise Daugherty (Genomics England Curator)

gene: TNNC2 was added gene: TNNC2 was added to Congenital myopathy. Sources: London South GLH Mode of inheritance for gene: TNNC2 was set to