Congenital myopathy
Gene: TNNT1EnsemblGeneIds (GRCh38): ENSG00000105048
EnsemblGeneIds (GRCh37): ENSG00000105048
OMIM: 191041, Gene2Phenotype
TNNT1 is in 3 panels
6 reviews
Achchuthan Shanmugasundram (Genomics England Curator)
The mode of inheritance of this gene has been updated to BOTH monoallelic and biallelic, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.Created: 26 Sep 2024, 10:39 a.m. | Last Modified: 26 Sep 2024, 10:39 a.m.
Panel Version: 4.42
Comment on mode of inheritance: As reviewed by Anna Sarkozy, monoallelic variants in TNNT1 have been reported in two unrelated families with nemaline myopathy and supported by in vitro functional studies. There is sufficient evidence available for updating the MOI from "BIALLELIC, autosomal or pseudoautosomal" to "BOTH monoallelic and biallelic, autosomal or pseudoautosomal" in the next GMS review.Created: 4 Apr 2023, 9:04 a.m. | Last Modified: 4 Apr 2023, 9:04 a.m.
Panel Version: 4.23
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Phenotypes
Nemaline myopathy 5, Amish type, OMIM:605355
Publications
Arina Puzriakova (Genomics England Curator)
- PMID: 25430424 (2015) - 2 year old Hispanic male diagnosed with nemaline myopathy and a homozygous variant c.323C>G (p.S108X) in the TNNT1 gene. Patient had low muscle tone, global muscle weakness (proximal more than distal), hip and knee contractures and developmental delay. Muscle biopsy confirmed nemaline myopathy.
- PMID: 12732643 (2003) - a lethal form of nemaline myopathy (known as ANM - Amish nemaline myopathy) found in family with a homozygous nonsense variant Glu180 in TNNT1 (previously known as TNT). ANM presents with tremors at birth, proximal contractures and hypotonia, and progressive weakness often leading to death from respiratory insufficiency.Created: 18 Jun 2025, 3:59 p.m. | Last Modified: 18 Jun 2025, 3:59 p.m.
Panel Version: 6.4
PMID: 32994279 - Three additional unrelated cases with nemaline myopathy due to different biallelic variants in TNNT1. The variants comprised a homozygous deletion of exons 8 and 9; two compound het nonsense and splice-site variants; and a homozygous nonsense variant. Western blot analysis revealed the total absence of the troponin protein in all three cases.Created: 5 Oct 2020, 9:33 a.m. | Last Modified: 5 Oct 2020, 9:33 a.m.
Panel Version: 2.7
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Nemaline myopathy 5, Amish type, 605355; Nemaline Myopathy
Publications
Louise Daugherty (Genomics England Curator)
Gene rating and review submitted by Rachael Mein, Viapath Guy's Hospital February 2019 on on behalf of London South GLH for the GMS Neurology specialist test group.Created: 30 Apr 2019, 10:09 a.m.
Rachael Mein (Viapath at Guy's Hospital)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
nemaline myopathy; Nemaline Myopathy, Recessive; Nemaline myopathy 5, Amish type, 605355
Publications
Variants in this GENE are reported as part of current diagnostic practice
Anna Sarkozy (Great Ormond Street Hospital)
comment re inheritance: both dominant and recessive TNNT1 gene variants have now been reported in patients with congenital myopathies. Dominant mutations are likely acting via a dominant negative mechanismCreated: 24 Mar 2023, 1:02 p.m. | Last Modified: 24 Mar 2023, 1:02 p.m.
Panel Version: 4.2
Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Phenotypes
nemaline myopathy; Nemaline Myopathy, Recessive; Nemaline myopathy 5, Amish type, 605355; autpsomal dominant nemaline myopathy
Publications
Helen Brittain (Genomics England Curator)
Comment when marking as ready: several families in 3 populations.Created: 2 Feb 2017, 12:03 p.m.
Initially described in Amish population only, with founder effect. Recently described in 7 Palestinian families (single mutation) and Hispanic individual. In view of the number of families and an appropriate phenotype, considered green. However, founder mutations make up the majority of reported cases to date.Created: 26 Jan 2017, 11:59 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Nemaline myopathy 5, Amish type 605355
Publications
Details
- Mode of Inheritance
- BOTH monoallelic and biallelic, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- London South GLH
- Expert Review Green
- Expert
- Radboud University Medical Center, Nijmegen
- Illumina TruGenome Clinical Sequencing Services
- UKGTN
- Emory Genetics Laboratory
- Phenotypes
-
- Nemaline myopathy 5, Amish type, OMIM:605355
- OMIM
- 191041
- Clinvar variants
- Variants in TNNT1
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Removed Tag, Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_23_MOI was removed from gene: TNNT1. Tag Q2_23_NHS_review was removed from gene: TNNT1.
Set mode of inheritance
Achchuthan Shanmugasundram (Genomics England Curator)Mode of inheritance for gene TNNT1 was changed from BIALLELIC, autosomal or pseudoautosomal to BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: TNNT1 were set to 26296490; 25430424; 32994279
Added Tag, Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_23_MOI tag was added to gene: TNNT1. Tag Q2_23_NHS_review tag was added to gene: TNNT1.
Removed Tag, Removed Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_23_promote_green was removed from gene: TNNT1. Tag Q2_23_NHS_review was removed from gene: TNNT1.
Added Tag, Added Tag
Achchuthan Shanmugasundram (Genomics England Curator)Tag Q2_23_promote_green tag was added to gene: TNNT1. Tag Q2_23_NHS_review tag was added to gene: TNNT1.
Set mode of inheritance
Achchuthan Shanmugasundram (Genomics England Curator)Mode of inheritance for gene: TNNT1 was changed from BIALLELIC, autosomal or pseudoautosomal to BIALLELIC, autosomal or pseudoautosomal
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: TNNT1 were set to 26296490; 25430424
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: TNNT1 were changed from nemaline myopathy; Nemaline Myopathy, Recessive; Nemaline myopathy 5, Amish type, 605355 to Nemaline myopathy 5, Amish type, OMIM:605355
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to TNNT1.
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source London South GLH was added to TNNT1. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Helen Brittain (Genomics England Curator)Promoted 22/02/2017 after curation discussion and further review with members of the Genomics England curation team. Participants who are offered this panel will automatically be offered the following three panels: 1) Congenital muscular dystrophy 2) Congenital myasthenia and 3) Paediatric motor neuronopathy as this will cover a large range of differentials for a weak infant, for where the strict inclusion criteria are not applicable in view of the availability of muscle biopsy testing in peripheral paediatric units.
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Helen Brittain (Genomics England Curator)Publications for TNNT1 were set to 26296490; 25430424
Added New Source
Eik Haraldsdottir (Genomics England)TNNT1 was added to Congenital myopathypanel. Sources: Expert
Added New Source
GEL ()TNNT1 was added to Congenital myopathypanel. Sources: Radboud University Medical Center, Nijmegen
Added New Source
GEL ()TNNT1 was added to Congenital myopathypanel. Sources: Illumina TruGenome Clinical Sequencing Services
Added New Source
GEL ()TNNT1 was added to Congenital myopathypanel. Sources: UKGTN
Added New Source
GEL ()TNNT1 was added to Congenital myopathypanel. Sources: Emory Genetics Laboratory