Distal myopathies
Gene: GIPC1EnsemblGeneIds (GRCh38): ENSG00000123159
EnsemblGeneIds (GRCh37): ENSG00000123159
OMIM: 605072, Gene2Phenotype
GIPC1 is in 1 panel
2 reviews
Sarah Leigh (Genomics England Curator)
Comment on list classification: This gene will remain red as it is only the GIPC1_GGC expansion that has been associated with disease.Created: 10 Aug 2023, 5:16 p.m. | Last Modified: 10 Aug 2023, 5:16 p.m.
Panel Version: 3.12
The GIPC1_GGC expansion has been associated with Oculopharyngodistal myopathy 2 (OMIM:618940), but not with a phenotype in Gen2Phen. PMIDs 32413282 and 33374016 report the 5' UTR GIPC1 expansion in numerous cases of oculopharyngodistal myopathy. No other disease associated GIPC1 variants have been reported to date.Created: 10 Aug 2023, 5:14 p.m. | Last Modified: 10 Aug 2023, 5:14 p.m.
Panel Version: 3.11
Zornitza Stark (Australian Genomics)
PMID 33374016: a Chinese cohort of 41 patients with the clinical diagnosis of oculopharyngodistal myopathy (21 cases from seven families and 20 sporadic cases). Overall, the repeat expansion in GIPC1 was identified in 51.9% independent pedigrees (4/7 families and 10/20 sporadic cases). The number of CGG repeats was <30 in controls but >60 in affected individuals. There was a slight correlation between repeat size and the age at onset. Both repeat expansion and retraction were observed during transmission but somatic instability was not evident.Created: 19 Apr 2021, 8:46 a.m. | Last Modified: 19 Apr 2021, 8:46 a.m.
Panel Version: 1.29
19 families reported with heterozygous trinucleotide repeat expansion in the 5-prime untranslated region and onset of distal muscle weakness, mainly of the lower limbs, and/or ophthalmoplegia in the second or third decades of life. Note this is unlikely to be tractable currently by most NGS assays, and may be best dealt with as an STR disorder here.
Sources: LiteratureCreated: 17 Jul 2020, midnight
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Oculopharyngodistal myopathy-2 (OPDM2), MIM#618940
Publications
Mode of pathogenicity
Other
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Red
- Phenotypes
-
- Oculopharyngodistal myopathy 2, OMIM:618940
- oculopharyngodistal myopathy 2, MONDO:0030134
- Tags
- OMIM
- 605072
- Clinvar variants
- Variants in GIPC1
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Other
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: gipc1 has been classified as Red List (Low Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: GIPC1 were changed from Oculopharyngodistal myopathy 2, OMIM:618940 to Oculopharyngodistal myopathy 2, OMIM:618940; oculopharyngodistal myopathy 2, MONDO:0030134
Added Tag
Sarah Leigh (Genomics England Curator)Tag STR tag was added to gene: GIPC1.
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: gipc1 has been classified as Red List (Low Evidence).
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: gipc1 has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: GIPC1 were changed from Oculopharyngodistal myopathy-2 (OPDM2), MIM#618940 to Oculopharyngodistal myopathy 2, OMIM:618940
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: GIPC1 were set to 32413282
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set mode of pathogenicity
Zornitza Stark (Australian Genomics)gene: GIPC1 was added gene: GIPC1 was added to Distal myopathies. Sources: Literature Mode of inheritance for gene: GIPC1 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: GIPC1 were set to 32413282 Phenotypes for gene: GIPC1 were set to Oculopharyngodistal myopathy-2 (OPDM2), MIM#618940 Mode of pathogenicity for gene: GIPC1 was set to Other Review for gene: GIPC1 was set to GREEN