Intellectual disability update Jan 2018
Gene: MAPK10EnsemblGeneIds (GRCh38): ENSG00000109339
EnsemblGeneIds (GRCh37): ENSG00000109339
OMIM: 602897, Gene2Phenotype
MAPK10 is in 4 panels
2 reviews
Helen Brittain (Genomics England Curator)
Comment when marking as ready: Small amount of evidence for variants in this gene with an isolated ID presentation. Watchlist tag added.Created: 8 Mar 2018, 3:24 p.m.
Louise Daugherty (Genomics England Curator)
added watchlist tagCreated: 8 Mar 2018, 3:21 p.m.
Comment on list classification: Changed from Red to Amber after clinical review commentsCreated: 8 Mar 2018, 3:21 p.m.
After clinical review it was thought this gene should rated Amber. HB commented that PMID 23329067 details two cases with translocations where the breakpoints include MAPK10. One presented with ID in the absence of seizures, although cannot find wider support for this hypothesis. Worth marking as amber and watchlist on the ID panel.Created: 8 Mar 2018, 3:20 p.m.
Lennox-Gastaut syndrome (LGS) belongs to the group of severe childhood epileptic encephalopathies and is a severe form of epilepsy associated with intractable seizures and impaired cognition. Although there is enough evidence to support the phenotype, MAPK10 is a candidate gene tested for this disorder and variants within this gene are reported as part of current diagnostic practice.Created: 7 Mar 2018, 11:09 a.m.
Comment on phenotypes: added phenotype from Orphanet and Gene2PhenotypeCreated: 7 Mar 2018, 11:07 a.m.
Monoallelic confirmed on G2P, not on the imprinted gene list. This is a possible DD gene in Gene2Phenotype for EPILEPTIC ENCEPHALOPATHY LENNOX-GASTAUT TYPECreated: 7 Mar 2018, 11 a.m.
I am not sure if this should be a Green on the Intellectual Disability panel since it epilepsy associated with intractable seizures that result in the mental deterioration, ID is not independently present? It is currently rated Green on the Epilepsy Plus and Epileptic encephalopathy panels. To be reviewed by internal clinical team as to wether this gene should be Green on ID panel.Created: 7 Mar 2018, 10:57 a.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Amber
- Phenotypes
-
- Lennox-Gastaut syndrome
- LGS
- Epileptic Encephalopathy
- Epileptic Encephalopathy Lennox-Gastaut type
- Tags
- OMIM
- 602897
- Clinvar variants
- Variants in MAPK10
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for MAPK10 were set to Lennox-Gastaut syndrome; LGS; Epileptic Encephalopathy; Epileptic Encephalopathy Lennox-Gastaut type
Set publications
Louise Daugherty (Genomics England Curator)Publications for MAPK10 were set to 23329067
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for MAPK10 was changed from to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Added New Source
Ellen McDonagh (Genomics England Curator)MAPK10 was added to Intellectual disability update Jan 2018 panel. Sources: Expert Review Red
Created
Ellen McDonagh (Genomics England Curator)MAPK10 was created by Ellen McDonagh