Intellectual disability update Jan 2018
Gene: NDST1EnsemblGeneIds (GRCh38): ENSG00000070614
EnsemblGeneIds (GRCh37): ENSG00000070614
OMIM: 600853, Gene2Phenotype
NDST1 is in 2 panels
2 reviews
Helen Brittain (Genomics England Curator)
Comment when marking as ready: Sufficient cases, appropriate phenotypeCreated: 5 Mar 2018, 12:27 p.m.
Comment on mode of pathogenicity: All reported pathogenic variants to date have been missense; occurring at highly conserved residues in the sulfotransferase domain, predicted to change the substrate-binding domain and/or to disrupt the 3-dimensional structure of the enzyme.Created: 5 Mar 2018, 12:26 p.m.
Louise Daugherty (Genomics England Curator)
Comment on list classification: Changed rating from Red to Green as there is enough evidence in the literature to support intellectual disability phenotype.Created: 15 Feb 2018, 4:29 p.m.
Comment on phenotypes: Mental retardation, autosomal recessive 46 (MRT46) is a disorder characterized by significantly below average general intellectual functioning associated with impairments in adaptive behavior and manifested during the developmental period. MRT46 manifestations include delayed psychomotor development apparent from infancy or early childhood, delayed or absent expressive speech, hypotonia, and therapy-responsive seizures in some patients. Behavioral abnormalities are variable and include aggression, self-injurious behavior, and sleep disturbances.Created: 15 Feb 2018, 4:26 p.m.
Comment on mode of inheritance: from OMIM The transmission pattern of MRT46 in the families reported by Reuter et al., 2014 (PMID:25125150) was consistent with autosomal recessive inheritance.Created: 15 Feb 2018, 4:22 p.m.
Comment on publications: Reuter et al., 2014 (PMID:25125150) reported 8 patients from 4 unrelated families with nonsyndromic intellectual disability. Two of the families had previously been reported by Najmabadi et al., 2011 (PMID:21937992)Created: 15 Feb 2018, 4:20 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Phenotypes
-
- Mental retardation, autosomal recessive 46, 616116
- MRT46
- Intellectual disability
- OMIM
- 600853
- Clinvar variants
- Variants in NDST1
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Other - please provide details in the comments
- Panels with this gene
History Filter Activity
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set mode of pathogenicity
Helen Brittain (Genomics England Curator)Mode of pathogenicity for NDST1 was changed to Other - please provide details in the comments
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for NDST1 were set to Mental retardation, autosomal recessive 46, 616116; MRT46; Intellectual disability
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for NDST1 were set to Mental retardation, autosomal recessive 46, 616116; MRT46
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for NDST1 was changed from BIALLELIC, autosomal or pseudoautosomal to BIALLELIC, autosomal or pseudoautosomal
Set publications
Louise Daugherty (Genomics England Curator)Publications for NDST1 were set to 25125150; 21937992
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for NDST1 was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Ellen McDonagh (Genomics England Curator)NDST1 was added to Intellectual disability update Jan 2018 panel. Sources: Expert Review Red
Created
Ellen McDonagh (Genomics England Curator)NDST1 was created by Ellen McDonagh