Intellectual disability update Jan 2018
Gene: NHP2EnsemblGeneIds (GRCh38): ENSG00000145912
EnsemblGeneIds (GRCh37): ENSG00000145912
OMIM: 606470, Gene2Phenotype
NHP2 is in 14 panels
1 review
Louise Daugherty (Genomics England Curator)
Comment on publications: added publications to support the association to the disorderCreated: 23 Feb 2018, 5:11 p.m.
Comment on list classification: Associated with phenotype in OMIM and as a probable G2P. Biallelic variants of the gene NHP2 are known to cause Dyskeratosis congenital (DC) and have been reported in two families to date, of which only one one case has been reported with intellectual disability. There is potentially a third case for Dyskeratosis congenital PMID: 25907943 but there is no mention of intellectual disability phenotype.
From Savage et al, 2009 PMID:20301779 patients with DC are at increased risk for progressive bone marrow failure (BMF), myelodysplastic syndrome (MDS) or acute myelogenous leukemia (AML), solid tumors (usually squamous cell carcinoma of the head/neck or anogenital cancer), and pulmonary fibrosis. Other findings can include: abnormal pigmentation changes not restricted to the upper chest and neck, eye abnormalities (epiphora, blepharitis, sparse eyelashes, ectropion, entropion, trichiasis), and dental abnormalities (caries, periodontal disease, taurodauntism). Although most persons with DC have normal psychomotor development and normal neurologic function, significant developmental delay is present in the two variants in which additional findings include cerebellar hypoplasia (Hoyeraal Hreidarsson syndrome) and bilateral exudative retinopathy and intracranial calcifications (Revesz syndrome), of which the gene NHP2 is not involved.Created: 23 Feb 2018, 5:04 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Red
- Gene2Phenotype
- Phenotypes
-
- Dyskeratosis congenita, autosomal recessive 2, 613987
- OMIM
- 606470
- Clinvar variants
- Variants in NHP2
- Penetrance
- None
- Publications
- Panels with this gene
-
- Childhood solid tumours cancer susceptibility
- Childhood solid tumours
- Haematological malignancies for rare disease
- Haematological malignancies cancer susceptibility
- Cytopenia - NOT Fanconi anaemia
- Pulmonary fibrosis familial
- Intellectual disability
- Ductal plate malformation
- Rare anaemia
- Cytopenias and congenital anaemias
- COVID-19 research
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Fetal anomalies
- DDG2P
History Filter Activity
Set publications
Louise Daugherty (Genomics England Curator)Publications for NHP2 were set to 25182133; 18523010; 25907943; 20301779
Set publications
Louise Daugherty (Genomics England Curator)Publications for NHP2 were set to 25182133; 18523010; 25907943
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for NHP2 was changed from to BIALLELIC, autosomal or pseudoautosomal
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for NHP2 were set to Dyskeratosis congenita, autosomal recessive 2, 613987
Set publications
Louise Daugherty (Genomics England Curator)Publications for NHP2 were set to 25182133; 18523010; 25907943
Set publications
Louise Daugherty (Genomics England Curator)Publications for NHP2 were set to 25182133; 18523010
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Added New Source
Ellen McDonagh (Genomics England Curator)NHP2 was added to Intellectual disability update Jan 2018 panel. Sources: Gene2Phenotype
Created
Ellen McDonagh (Genomics England Curator)NHP2 was created by Ellen McDonagh