Structural eye disease
Gene: MIR204EnsemblGeneIds (GRCh38): ENSG00000207935
EnsemblGeneIds (GRCh37): ENSG00000207935
OMIM: 610942, Gene2Phenotype
MIR204 is in 3 panels
5 reviews
Arina Puzriakova (Genomics England Curator)
The rating of this gene has been updated to Green and the mode of inheritance set to 'MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted' following NHS Genomic Medicine Service approval.Created: 2 May 2024, 1:56 p.m. | Last Modified: 2 May 2024, 1:56 p.m.
Panel Version: 3.79
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sarah Leigh (Genomics England Curator)
Comment on mode of pathogenicity: The authors of PMID: 26056285 propose MIR204 n.37C>T is likely to have a gain-of-function mechanism.Created: 28 Sep 2023, 5:15 p.m. | Last Modified: 28 Sep 2023, 5:15 p.m.
Panel Version: 3.8
Comment on list classification: There is enough evidence for this gene to be rated GREEN at the next major review.Created: 28 Sep 2023, 5:15 p.m. | Last Modified: 28 Sep 2023, 5:15 p.m.
Panel Version: 3.7
A MIR204 variant has been associated with Retinal dystrophy and iris coloboma with or without cataract (OMIM:616722) and as limited Gen2Phen gene for the same condition. One variant (n.37C>T) has been reported and is shown to segregate with the phenotype in two unrelated families (haplotype analysis in PMID: 37321975). PMID: 26056285 presents in vitro studies, which show that n.37C>T results in significant alterations in the targeting capabilities of miR-204. In vivo injection of n.37C>T into medaka fish (Oryzias latipes), cause a phenotype which is consistent with that observed in the family carrying the variant. Additionally, knockdown assays in medaka fish showed that miR-204 was necessary for normal photoreceptor function. The authors of PMID: 26056285 propose MIR204 n.37C>T is likely to have a gain-of-function mechanism.Created: 28 Sep 2023, 5:13 p.m. | Last Modified: 28 Sep 2023, 5:13 p.m.
Panel Version: 3.5
Hannah Knight (NIHR BioResource - University of Cambridge)
PMID: 37321975 - same variant recently reported in a Czech family in four affected members with chorioretinal dystrophy (variably associated with iris coloboma, congenital glaucoma, and premature cataracts)Created: 18 Sep 2023, 10:14 a.m. | Last Modified: 18 Sep 2023, 10:14 a.m.
Panel Version: 3.4
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Retinal dystrophy and iris coloboma with or without cataract 616722
Publications
Nicola Ragge (Birmingham Women's and Children's NHS Foundation Hospital Trust)
Conte: one 5-generation pedigree, 9 members affected by bilateral iris coloboma and rod/cone dystrophy, variant fully segregates. Medaka model has microphthalmia and optic nerve colobomaCreated: 19 Jun 2019, 3:32 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT; 616722
Publications
Ivone Leong (Genomics England Curator)
Promoted from red to amber based on the expert review provided.Created: 25 Apr 2019, 10:04 a.m.
Submitted on behalf of Professor Nicola Ragge (Wessex and West Midlands GLH). Conte: one 5-generation pedigree, 9 members affected by bilateral iris coloboma and rod/cone dystrophy, variant fully segregates. Medaka model has microphthalmia and optic nerve colobomaCreated: 17 Apr 2019, 3:30 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT, 616722
Publications
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- ?Retinal dystrophy and iris coloboma with or without cataract, OMIM:616722
- familial progressive retinal dystrophy-iris coloboma-congenital cataract syndrome
- MONDO:0014747
- Tags
- OMIM
- 610942
- Clinvar variants
- Variants in MIR204
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
History Filter Activity
Removed Tag, Removed Tag
Arina Puzriakova (Genomics England Curator)Tag Q3_23_promote_green was removed from gene: MIR204. Tag Q3_23_NHS_review was removed from gene: MIR204.
Added New Source, Status Update
Arina Puzriakova (Genomics England Curator)Source Expert Review Green was added to MIR204. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Added Tag, Added Tag
Sarah Leigh (Genomics England Curator)Tag locus-type-rna-micro tag was added to gene: MIR204. Tag Q3_23_NHS_review tag was added to gene: MIR204.
Set mode of pathogenicity
Sarah Leigh (Genomics England Curator)Mode of pathogenicity for gene: MIR204 was changed from to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: mir204 has been classified as Amber List (Moderate Evidence).
Added Tag
Sarah Leigh (Genomics England Curator)Tag Q3_23_promote_green tag was added to gene: MIR204.
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: MIR204 were set to 26056285
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: MIR204 were changed from Retinal dystrophy and iris coloboma with or without cataract 616722 to ?Retinal dystrophy and iris coloboma with or without cataract, OMIM:616722; familial progressive retinal dystrophy-iris coloboma-congenital cataract syndrome; MONDO:0014747
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Amber was added to MIR204. Rating Changed from Red List (low evidence) to Amber List (moderate evidence)
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: MIR204 were changed from Retinal dystrophy and iris coloboma with or without cataract 616722; RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT, 616722 to Retinal dystrophy and iris coloboma with or without cataract 616722
Added New Source, Set Phenotypes
Ivone Leong (Genomics England Curator)Source NHS GMS was added to MIR204. Added phenotypes RETINAL DYSTROPHY AND IRIS COLOBOMA WITH OR WITHOUT CONGENITAL CATARACT, 616722 for gene: MIR204
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Ellen McDonagh (Genomics England Curator)gene: MIR204 was added gene: MIR204 was added to Structural eye disease. Sources: Expert Review Red Mode of inheritance for gene: MIR204 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Publications for gene: MIR204 were set to 26056285 Phenotypes for gene: MIR204 were set to Retinal dystrophy and iris coloboma with or without cataract 616722