Mosaic skin disorders - deep sequencing
Gene: GJA1EnsemblGeneIds (GRCh38): ENSG00000152661
EnsemblGeneIds (GRCh37): ENSG00000152661
OMIM: 121014, Gene2Phenotype
GJA1 is in 25 panels
2 reviews
Ida Ertmanska (Genomics England Curator)
Comment on list classification: As there is only one individual reported in literature with a skin disorder and a mosaic GJA1 variant, this gene should remain Red for Mosaic skin disorders - deep sequencing, until more evidence emerges.Created: 2 Dec 2025, 5:09 p.m. | Last Modified: 2 Dec 2025, 5:09 p.m.
Panel Version: 3.5
PMID: 27890787 Umegaki-Arao et al., 2017
14-year-old girl with inflammatory linear verrucous epidermal nevus (ILVEN); onset at 1yo, worsening over time. At age 14, she developed widespread erythematous plaques and verrucous plaques along Blaschko’s lines on the extremities and buttocks, as well as palmoplantar hyperkeratosis. Hair, teeth, and nails were not affected.
8 candidate variants detected; GJA1 c.131C>T (p.A44V) was the only candidate mutation detected in affected epidermis but not in white blood cells; detected in 22 of 72 reads (30%).
The same variant but germline was reported as causative in erythrokeratodermia variabilis et progressiva (EKVP) in PMID: 25398053 Boyden et al., 2015).Created: 2 Dec 2025, 5:05 p.m. | Last Modified: 2 Dec 2025, 5:12 p.m.
Panel Version: 3.7
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
inflammatory linear verrucous epidermal nevus, MONDO:0019318
Publications
Veronica Kinsler (UCL)
Mosaic, potential for germline transmission
Sources: Expert ReviewCreated: 31 Oct 2025, 2:28 p.m.
Mode of inheritance
Other
Phenotypes
Inflammatory Linear Verrucous Epidermal Naevi (ILVEN)
Publications
- PMID: 27890787
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Red
- Phenotypes
-
- inflammatory linear verrucous epidermal nevus, MONDO:0019318
- OMIM
- 121014
- Clinvar variants
- Variants in GJA1
- Penetrance
- None
- Publications
- Panels with this gene
-
- Palmoplantar keratodermas
- Monogenic hearing loss
- Familial non syndromic congenital heart disease
- Primary lymphoedema
- Clefting
- Limb disorders
- Structural eye disease
- Inherited white matter disorders
- Corneal abnormalities
- Skeletal dysplasia
- Adult onset leukodystrophy
- Palmoplantar keratoderma and erythrokeratodermas
- Familial cicatricial alopecia
- Ichthyosis and erythrokeratoderma
- Intellectual disability
- Bilateral congenital or childhood onset cataracts
- Pigmentary skin disorders
- Mosaic skin disorders - deep sequencing
- Fetal anomalies
- DDG2P
- Adult onset hereditary spastic paraplegia
- White matter disorders and cerebral calcification - narrow panel
- Glaucoma (developmental)
- Childhood onset hereditary spastic paraplegia
- Rare genetic inflammatory skin disorders
History Filter Activity
Set mode of inheritance
Arina Puzriakova (Genomics England Curator)Mode of inheritance for gene: GJA1 was changed from Other to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: GJA1 were set to PMID:
Set Phenotypes
Ida Ertmanska (Genomics England Curator)Phenotypes for gene: GJA1 were changed from Inflammatory Linear Verrucous Epidermal Naevi (ILVEN) to inflammatory linear verrucous epidermal nevus, MONDO:0019318
Set publications
Ida Ertmanska (Genomics England Curator)Publications for gene: GJA1 were set to PMID: 27890787
Entity classified by Genomics England curator
Ida Ertmanska (Genomics England Curator)Gene: gja1 has been classified as Red List (Low Evidence).
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Veronica Kinsler (UCL)gene: GJA1 was added gene: GJA1 was added to Mosaic skin disorders - deep sequencing. Sources: Expert Review Mode of inheritance for gene: GJA1 was set to Other Publications for gene: GJA1 were set to PMID: 27890787 Phenotypes for gene: GJA1 were set to Inflammatory Linear Verrucous Epidermal Naevi (ILVEN) Review for gene: GJA1 was set to GREEN