Adult onset hereditary spastic paraplegia
Gene: CPT1CEnsemblGeneIds (GRCh38): ENSG00000169169
EnsemblGeneIds (GRCh37): ENSG00000169169
OMIM: 608846, Gene2Phenotype
CPT1C is in 2 panels
5 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 14 Mar 2022, 1:19 p.m. | Last Modified: 14 Mar 2022, 1:19 p.m.
Panel Version: 1.95
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Overall one family with confirmed adult-onset and one with childhood-onset have been reported, as well as two further unrelated cases but unfortunately without indication of age of onset. Although onset is variable, the gene-disease relationship is supported by a strong animal model, and therefore it is worth including CPT1C on both HSP panels as Green.Created: 22 Nov 2021, 4:36 p.m. | Last Modified: 22 Nov 2021, 4:36 p.m.
Panel Version: 1.86
Nick Beauchamp (Sheffield Diagnostic Genetics Service)
Adult onset. Mouse model. functional study. Single family. Two further patients in exome study (PMID: 30564185).Created: 10 May 2019, 11:28 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Publications
Variants in this GENE are reported as part of current diagnostic practice
Louise Daugherty (Genomics England Curator)
Green gene with Amber GLH rating, Gene discussed in view of discrepant rating(s) from GLH(s). Amber rating agreed at the GMS Neurology Specialist Test Group Webex on 17th May 2019.Created: 21 May 2019, 4:14 p.m.
Review and rating submitted byJames Polke (Neurogenetics Laboratory,Institute of Neurology, London), unless specified in the review comment, on behalf of London North GLH for GMS Neurology specialist test group.Created: 9 May 2019, 4:50 p.m.
James Polke (Neurogenetics Laboratory, Institute of Neurology, London)
only one family reported but great animal model replicates the phenotype. affected members of a large 3-generation Italian family with autosomal dominant spastic paraplegia-73. In sheffield HSP panelCreated: 25 Apr 2019, 1:22 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
?Spastic paraplegia 73, autosomal dominant, 616282
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Green
- Yorkshire and North East GLH
- NHS GMS
- London North GLH
- Phenotypes
-
- Spastic paraplegia 73, autosomal dominant, OMIM:616282
- OMIM
- 608846
- Clinvar variants
- Variants in CPT1C
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Ivone Leong (Genomics England Curator)Tag Q4_21_rating was removed from gene: CPT1C.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Green was added to CPT1C. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: cpt1c has been classified as Amber List (Moderate Evidence).
Added Tag
Arina Puzriakova (Genomics England Curator)Tag Q4_21_rating tag was added to gene: CPT1C.
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: CPT1C were changed from ?Spastic paraplegia 73, autosomal dominant, 616282 to Spastic paraplegia 73, autosomal dominant, OMIM:616282
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Amber was added to CPT1C. Rating Changed from Green List (high evidence) to Amber List (moderate evidence)
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: CPT1C were set to
Added New Source
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to CPT1C.
Added New Source, Set mode of inheritance, Set Phenotypes, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to CPT1C. Mode of inheritance for gene CPT1C was changed from to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown Added phenotypes ?Spastic paraplegia 73, autosomal dominant, 616282 for gene: CPT1C Rating Changed from Red List (low evidence) to Green List (high evidence)
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to CPT1C.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: CPT1C was added gene: CPT1C was added to Hereditary spastic paraplegia - adult onset. Sources: London North GLH Mode of inheritance for gene: CPT1C was set to