Adult onset hereditary spastic paraplegia
Gene: KDM5CEnsemblGeneIds (GRCh38): ENSG00000126012
EnsemblGeneIds (GRCh37): ENSG00000126012
OMIM: 314690, Gene2Phenotype
KDM5C is in 7 panels
7 reviews
Sarah Leigh (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 14 Mar 2022, 1:19 p.m. | Last Modified: 14 Mar 2022, 1:19 p.m.
Panel Version: 1.95
Arina Puzriakova (Genomics England Curator)
Review of literature showed that KDM5C is associated with a childhood-onset condition (MIM# 300534). However, the presenting feature is developmental delay and intellectual disability. Some patients develop progressive spasticity, but the age of onset is not clear from some case reports. Several publications describe adult patients but without any indication of when spasticity became evident.
Leaving the rating as Green, but with a recommendation for review at the next GMS panel update to assess whether this gene is appropriate for this adult onset panel (tagged Q3_21_phenotype). Inclusion may be justified to ensure identification of edge cases if relevant.
This gene is already Green on the 'Hereditary spastic paraplegia - childhood onset v.2.18' panel.Created: 19 Aug 2021, 11:34 a.m. | Last Modified: 19 Aug 2021, 11:34 a.m.
Panel Version: 1.39
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Mental retardation, X-linked, syndromic, Claes-Jensen type, OMIM:300534
Publications
Zornitza Stark (Australian Genomics)
Childhood onset.Created: 22 Sep 2020, 5:01 a.m. | Last Modified: 22 Sep 2020, 5:01 a.m.
Panel Version: 1.7
Nick Beauchamp (Sheffield Diagnostic Genetics Service)
Spastic diplegia present in majority of cases. Childhood onset. Additional patient with likely de novo nonsense mutation identified using Sheffield panel.Created: 10 May 2019, 7:47 a.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Publications
Variants in this GENE are reported as part of current diagnostic practice
Chris Buxton (North Bristol NHS Trust)
limited evidence. On Sheffield's Hsp panel, see current PA review statusCreated: 27 Apr 2019, 4:17 p.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Mental retardation, X-linked, syndromic, Claes-Jensen type, 300534; Intellectual disability; developmental delay; progressive spasticity; epilepsy; hypothyroidism
Publications
Louise Daugherty (Genomics England Curator)
Green gene with Amber GLH rating, Gene discussed in view of discrepant rating(s) from GLH(s). Green rating agreed at the GMS Neurology Specialist Test Group Webex on 17th May 2019.Created: 21 May 2019, 4:14 p.m.
Review and rating submitted byJames Polke (Neurogenetics Laboratory,Institute of Neurology, London), unless specified in the review comment, on behalf of London North GLH for GMS Neurology specialist test group.Created: 9 May 2019, 4:50 p.m.
Review and rating from Chris Buxton (North Bristol NHS Trust), submitted by Natalie Forrester (SWGLH - Bristol Genetics) on behalf of South West GLH for GMS Neurology specialist test group.Created: 27 Apr 2019, 4:30 p.m.
James Polke (Neurogenetics Laboratory, Institute of Neurology, London)
2 families from literature-progressive spastic paraplegia included in clinical feature. In sheffields HSP panelCreated: 25 Apr 2019, 1:22 p.m.
Mode of inheritance
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Phenotypes
Mental retardation, X-linked, syndromic, Claes-Jensen type, 300534; Intellectual disability; developmental delay; progressive spasticity; epilepsy; hypothyroidism
Details
- Mode of Inheritance
- X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
- Sources
-
- Expert Review Amber
- Yorkshire and North East GLH
- South West GLH
- NHS GMS
- London North GLH
- Phenotypes
-
- Intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, OMIM:300534
- OMIM
- 314690
- Clinvar variants
- Variants in KDM5C
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: KDM5C were changed from Intellectual disability; developmental delay; epilepsy; progressive spasticity; Mental retardation, X-linked, syndromic, Claes-Jensen type, 300534; hypothyroidism to Intellectual developmental disorder, X-linked syndromic, Claes-Jensen type, OMIM:300534
Removed Tag, Removed Tag
Ivone Leong (Genomics England Curator)Tag Q3_21_expert_review was removed from gene: KDM5C. Tag Q3_21_phenotype was removed from gene: KDM5C.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Amber was added to KDM5C. Rating Changed from Green List (high evidence) to Amber List (moderate evidence)
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: KDM5C were set to 10982473; 26919706; 15586325; 18697827
Added Tag, Added Tag
Arina Puzriakova (Genomics England Curator)Tag Q3_21_expert_review tag was added to gene: KDM5C. Tag Q3_21_phenotype tag was added to gene: KDM5C.
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: KDM5C were set to 10982473; 26919706; 15586325
Added New Source
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to KDM5C.
Set Phenotypes, Set publications
Louise Daugherty (Genomics England Curator)Added phenotypes Intellectual disability; developmental delay; epilepsy; progressive spasticity; Mental retardation, X-linked, syndromic, Claes-Jensen type, 300534; hypothyroidism for gene: KDM5C Publications for gene KDM5C were changed from to 10982473; 26919706; 15586325
Added New Source
Louise Daugherty (Genomics England Curator)Source South West GLH was added to KDM5C.
Added New Source, Set mode of inheritance, Set Phenotypes, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to KDM5C. Mode of inheritance for gene KDM5C was changed from to X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males) Added phenotypes Intellectual disability; developmental delay; epilepsy; progressive spasticity; Mental retardation, X-linked, syndromic, Claes-Jensen type, 300534; hypothyroidism for gene: KDM5C Rating Changed from Red List (low evidence) to Green List (high evidence)
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to KDM5C.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: KDM5C was added gene: KDM5C was added to Hereditary spastic paraplegia - adult onset. Sources: London North GLH Mode of inheritance for gene: KDM5C was set to