Genes in panel
- ADNP 1
- ANK2 1
- ARID1B 1
- ASH1L 1
- ASXL3 1
- CHD2 1
- CHD8 1
- CUL3 1
- DSCAM 1
- DYRK1A 1
- GRIN2B 1
- KATNAL2 1
- KMT2A 1
- KMT5B 1
- MYT1L 1
- NAA15 1
- POGZ 1
- PTEN 2
- RAB39B 2
- RELN 1
- SCN2A 1
- SETD5 1
- SHANK3 1
- SYNGAP1 1
- TBR1 1
- TRIP12 1
- ZNF292 2
- ANKRD11 1
- BAZ2B 2
- BCKDK 1
- BCL11A 1
- CACNA1D 1
- CACNA1H 1
- CACNA2D3 1
- CIC 1
- CMIP 3
- CNOT3 1
- CNTN4 1
- CNTNAP2 1
- CTNND2 1
- CUX1 1
- DDX3X 1
- DEAF1 1
- DIP2C 1
- ERBIN 1
- FOXP1 1
- GABRB3 1
- GIGYF2 1
- GRIA1 1
- GRIP1 1
- ILF2 1
- INTS6 1
- IRF2BPL 1
- KAT2B 1
- KDM5B 1
- KDM6A 1
- KMT2C 1
- LEO1 1
- MAGEL2 1
- MBOAT7 1
- MECP2 1
- MED13 1
- MED13L 1
- MET 1
- NCKAP1 1
- NLGN3 1
- NRXN1 1
- PHF3 1
- PTCHD1 1
- RANBP17 1
- RIMS1 1
- SCN9A 1
- SHANK2 1
- SLC6A1 1
- SMARCC2 1
- SPAST 1
- SRCAP 1
- SRSF11 1
- TAOK2 1
- TBL1XR1 1
- TCF20 1
- TNRC6B 1
- TRIO 1
- UBN2 1
- UPF3B 1
- USP15 1
- USP7 1
- WAC 1
- WDFY3 1
- ABAT 1
- ABCA10 1
- ABCA13 1
- ABCA7 1
- ACE 1
- ACHE 1
- ACTN4 1
- ADA 1
- ADCY3 1
- ADCY5 1
- ADK 1
- ADORA2A 1
- ADORA3 1
- ADRB2 1
- AFF2 1
- AGAP1 1
- AGAP2 1
- AGBL4 1
- AGMO 1
- AGO1 1
- AGTR2 1
- AHDC1 1
- AKAP9 1
- AMPD1 1
- AMT 1
- ANK3 1
- ANKS1B 1
- ANXA1 1
- APBA2 1
- APBB1 1
- APH1A 1
- AR 1
- ARHGAP11B 1
- ARHGAP32 1
- ARHGAP5 1
- ARHGEF10 1
- ARHGEF9 1
- ARNT2 1
- ASAP2 1
- ASMT 1
- ASPM 1
- ASTN2 1
- ATP10A 1
- ATP1A1 1
- ATP1A3 1
- ATP2B2 1
- ATP6V0A2 1
- ATRX 1
- AUTS2 1
- AVPR1A 1
- AVPR1B 1
- AZGP1 1
- BBS4 1
- BCAS1 1
- BICDL1 1
- BIRC6 1
- BRCA2 1
- BRD4 1
- BRSK1 1
- BST1 1
- BTAF1 1
- C15orf62 1
- C3orf58 1
- C4B 1
- CA6 1
- CACNA1B 1
- CACNA1E 1
- CACNA1F 1
- CACNA1G 1
- CACNA1I 1
- CACNA2D1 1
- CACNB2 1
- CADM1 1
- CADM2 1
- CADPS2 1
- CAMK2A 1
- CAMK4 1
- CAPN12 1
- CAPRIN1 1
- CARD11 1
- CASC4 2
- CASK 1
- CC2D1A 1
- CCDC88C 1
- CCDC91 1
- CCNG1 1
- CCT4 1
- CD276 1
- CD38 1
- CD99L2 1
- CDC42BPB 1
- CDH10 1
- CDH11 1
- CDH13 1
- CDH22 1
- CDH8 1
- CDH9 1
- CECR2 1
- CELF4 1
- CELF6 1
- CEP135 1
- CEP290 1
- CEP41 1
- CGNL1 1
- CHD1 2
- CHD3 1
- CHMP1A 1
- CHRM3 1
- CHRNA7 1
- CHRNB3 1
- CIB2 1
- CLASP1 1
- CLN8 1
- CLTCL1 1
- CNGB3 1
- CNKSR2 1
- CNR1 1
- CNTN3 1
- CNTN5 1
- CNTN6 1
- CNTNAP3 1
- CNTNAP4 1
- CNTNAP5 1
- COL28A1 1
- CPEB4 1
- CPT2 1
- CSMD1 1
- CSNK1E 1
- CTCF 1
- CTNNA3 1
- CTNNB1 1
- CTTNBP2 1
- CUL7 1
- CUX2 1
- CX3CR1 1
- CYFIP1 1
- CYLC2 1
- CYP11B1 1
- DAGLA 1
- DAPP1 1
- DDC 2
- DDX53 1
- DENR 1
- DIP2A 1
- DISC1 1
- DIXDC1 1
- DLG1 1
- DLGAP1 1
- DLGAP2 1
- DLGAP3 1
- DLX2 1
- DLX6 1
- DMXL2 1
- DNAH10 1
- DNAH17 1
- DNAH3 1
- DNER 1
- DNMT3A 1
- DOCK1 1
- DOCK4 1
- DOCK8 1
- DPP10 1
- DPP4 1
- DPP6 1
- DPYD 1
- DPYSL2 1
- DPYSL3 1
- DRD1 1
- DRD2 1
- DRD3 1
- DST 1
- DUSP15 1
- DVL3 1
- DYDC1 1
- DYDC2 1
- DYNC1H1 1
- EFR3A 1
- EHMT1 1
- EIF3G 1
- EIF4E 1
- ELAVL2 1
- ELAVL3 1
- ELOVL2 1
- ELP4 1
- EMSY 1
- EN2 1
- EP300 1
- EP400 1
- EPC2 1
- EPHB2 1
- EPPK1 1
- ERG 1
- ERMN 1
- ESR2 1
- ESRRB 1
- ETFB 1
- EXOC3 1
- EXOC5 1
- EXOC6 1
- EXOC6B 1
- EXT1 1
- FABP5 1
- FAM47A 1
- FAM92B 2
- FAN1 1
- FAT1 1
- FBN1 1
- FBXO11 1
- FBXO33 1
- FBXO40 1
- FCRL6 1
- FEZF2 1
- FGA 1
- FHIT 1
- FOXP2 1
- FRK 1
- GABBR2 1
- GABRA4 1
- GABRG3 1
- GALNT13 1
- GALNT14 1
- GALNT8 1
- GAS2 1
- GDA 1
- GGNBP2 1
- GIGYF1 1
- GLIS1 1
- GLO1 1
- GLRA2 1
- GNAS 1
- GNB1L 1
- GPC4 1
- GPC6 1
- GPD2 1
- GPHN 1
- GPR37 1
- GPR85 1
- GPX1 1
- GRID1 1
- GRID2 1
- GRID2IP 1
- GRIK2 1
- GRIK3 1
- GRIK4 1
- GRIK5 1
- GRIN1 1
- GRIN2A 1
- GRM5 1
- GRM7 1
- GSTM1 1
- GTF2I 1
- GUCY1A2 1
- HDLBP 1
- HECTD4 1
- HECW2 1
- HIVEP3 1
- HLA-A 1
- HLA-B 1
- HLA-DRB1 1
- HLA-G 1
- HMGN1 1
- HNRNPH2 1
- HNRNPU 1
- HOMER1 1
- HRAS 1
- HS3ST5 1
- HSD11B1 1
- HTR1B 1
- HTR3A 1
- HTR3C 1
- HYDIN 1
- ICA1 1
- IL1R2 1
- IL1RAPL1 1
- IL1RAPL2 1
- IMMP2L 1
- INPP1 1
- IQGAP3 1
- IQSEC2 1
- ITGB3 1
- ITPR1 1
- JARID2 1
- JMJD1C 1
- KANK1 1
- KAT6A 1
- KATNAL1 1
- KCND2 1
- KCND3 1
- KCNJ10 1
- KCNJ15 1
- KCNK7 1
- KCNMA1 2
- KCNQ2 1
- KCNQ3 1
- KCTD13 1
- KDM4B 1
- KDM4C 1
- KDM5C 1
- KDM6B 1
- KHDRBS2 1
- KIAA1586 1
- KIF13B 1
- KIF14 1
- KIF5C 1
- KIRREL3 1
- KLF16 1
- KMT2E 1
- KRR1 1
- KRT26 1
- LAMA1 1
- LAMB1 1
- LEP 1
- LILRB2 1
- LIN7B 1
- LMX1B 1
- LRBA 1
- LRFN2 1
- LRFN5 1
- LRP2 1
- LRRC1 1
- LRRC4 1
- LZTR1 1
- LZTS2 1
- MACROD2 1
- MAOA 1
- MAOB 1
- MAPK3 1
- MARK1 1
- MBD1 1
- MBD3 1
- MBD4 1
- MBD5 1
- MBD6 1
- MCM4 1
- MCM6 1
- MCPH1 1
- MDGA2 1
- MEF2C 1
- MEGF10 1
- MEGF11 1
- MFRP 1
- MIB1 1
- MIR137 2
- MKL2 1
- MNT 1
- MPP6 2
- MSANTD2 1
- MSR1 1
- MTF1 1
- MTHFR 1
- MTOR 1
- MUC12 1
- MUC4 1
- MYH10 1
- MYH4 1
- MYO16 1
- MYO1E 1
- MYO5A 1
- MYO5C 1
- MYO9B 1
- NAALADL2 1
- NACC1 1
- NAV2 1
- NBEA 1
- NCKAP5 1
- NCOR1 1
- NDUFA5 1
- NEO1 1
- NEXMIF 1
- NFIA 1
- NFIB 1
- NINL 1
- NIPA1 1
- NIPA2 1
- NLGN1 1
- NLGN2 1
- NLGN4X 1
- NLGN4Y 1
- NOTCH2NL 2
- NPAS2 1
- NR1D1 1
- NR2F1 1
- NR3C2 1
- NR4A2 1
- NRCAM 1
- NRP2 1
- NRXN2 1
- NRXN3 1
- NSMCE3 1
- NTNG1 1
- NTRK1 1
- NTRK3 1
- NUAK1 1
- NUDCD2 1
- NUP133 1
- NXPH1 1
- ODF3L2 1
- OFD1 1
- OPHN1 1
- OR1C1 1
- OR2M4 1
- OR2T10 1
- OR52M1 1
- OTUD7A 1
- OTX1 1
- OXT 1
- OXTR 1
- P2RX5 1
- P4HA2 1
- PAH 1
- PAK2 1
- PARD3B 1
- PATJ 1
- PAX5 1
- PCDH10 1
- PCDH11X 1
- PCDH15 1
- PCDH9 1
- PCDHA1 1
- PCDHA10 1
- PCDHA11 1
- PCDHA12 1
- PCDHA13 1
- PCDHA2 1
- PCDHA3 1
- PCDHA4 1
- PCDHA5 1
- PCDHA6 1
- PCDHA7 1
- PCDHA8 1
- PCDHA9 1
- PCDHAC1 1
- PCDHAC2 1
- PDCD1 1
- PDE1C 1
- PER1 1
- PER2 1
- PEX7 1
- PHB 1
- PHF2 1
- PHIP 1
- PHRF1 1
- PIK3CG 1
- PITX1 1
- PLAUR 1
- PLCB1 1
- PLN 1
- PLXNA3 1
- PLXNA4 1
- PLXNB1 1
- PNPLA7 1
- POLA2 1
- POMT1 1
- PON1 1
- POT1 1
- PPFIA1 1
- PPM1D 1
- PPP1R1B 1
- PPP2R1B 1
- PPP2R5D 1
- PREX1 1
- PRICKLE1 1
- PRICKLE2 1
- PRKCB 1
- PRKDC 1
- PRKN 1
- PRODH 1
- PRPF39 1
- PRUNE2 1
- PSD3 1
- PTBP2 1
- PTGS2 1
- PTK7 1
- PTPN11 1
- PTPRB 1
- PTPRC 1
- PTPRT 1
- PXDN 1
- PYHIN1 1
- QRICH1 1
- RAB11FIP5 1
- RAB2A 1
- RAB43 1
- RAD21L1 1
- RAI1 1
- RAPGEF4 1
- RASSF5 1
- RBFOX1 1
- RBM27 1
- REEP3 1
- RERE 1
- RFX3 1
- RGS7 1
- RHOXF1 1
- RIMS3 1
- RIT2 1
- RNF135 1
- RNF38 1
- ROBO2 1
- RPL10 1
- RPS6KA2 1
- RPS6KA3 1
- SAE1 1
- SAMD11 1
- SASH1 1
- SATB2 1
- SBF1 1
- SCFD2 1
- SCN1A 1
- SCN4A 1
- SCN8A 1
- SCP2 1
- SDC2 1
- SEMA5A 1
- SERPINE1 1
- SETBP1 1
- SETD1B 1
- SETD2 1
- SETDB1 1
- SETDB2 1
- SEZ6L2 1
- SGSM3 1
- SHANK1 1
- SHOX 1
- SIN3A 1
- SLC12A5 1
- SLC1A1 1
- SLC22A15 1
- SLC22A9 1
- SLC24A2 1
- SLC25A12 1
- SLC25A27 1
- SLC25A39 1
- SLC27A4 1
- SLC29A4 1
- SLC35B1 1
- SLC38A10 1
- SLC4A10 1
- SLC6A3 1
- SLC6A4 1
- SLC6A8 1
- SLC7A3 1
- SLC7A5 1
- SLC7A7 1
- SLC9A9 1
- SLCO1B3 1
- SLITRK5 1
- SMAD4 1
- SMARCA4 1
- SMC3 1
- SMG6 1
- SNAP25 1
- SND1 1
- SNTG2 1
- SOD1 1
- SPARCL1 1
- SPP2 1
- SRGAP3 1
- SSPO 1
- SSRP1 1
- ST7 1
- ST8SIA2 1
- STK39 1
- STX1A 1
- STXBP1 1
- STXBP5 1
- STYK1 1
- SYAP1 1
- SYN1 1
- SYN2 1
- SYNCRIP 1
- SYNE1 1
- SYNJ1 1
- SYT17 1
- TAF1C 1
- TAF6 1
- TANC2 2
- TBC1D31 1
- TBC1D5 1
- TBL1X 1
- TBX1 1
- TCF4 1
- TCF7L2 1
- TDO2 1
- TECTA 1
- TERB2 1
- TERF2 1
- TET2 1
- THBS1 1
- THRA 1
- TLK2 1
- TM4SF19 1
- TMLHE 1
- TMPRSS9 2
- TOP3B 1
- TPO 1
- TRAF7 1
- TRAPPC9 1
- TRIM33 1
- TRPC6 1
- TRPM1 1
- TSC2 1
- TSHZ3 1
- TSPAN17 1
- TSPAN7 1
- TSPOAP1 1
- TTC25 2
- TTN 1
- TUBGCP5 1
- UBE2H 1
- UBE3A 1
- UBE3C 1
- UBR5 1
- UNC13A 1
- UNC79 1
- UNC80 1
- USH2A 1
- USP45 1
- USP9Y 1
- VASH1 1
- VDR 1
- VIL1 1
- VSIG4 1
- WNK3 1
- WNT1 1
- WWOX 1
- XPO1 1
- YEATS2 1
- YTHDC2 1
- YWHAE 1
- ZBTB16 1
- ZBTB20 1
- ZC3H4 1
- ZMYND11 1
- ZNF18 1
- ZNF385B 1
- ZNF462 1
- ZNF517 1
- ZNF548 1
- ZNF559 1
- ZNF626 1
- ZNF713 1
- ZNF774 1
- ZNF804A 1
- ZNF827 1
- ZWILCH 1
- RIMS2 1
STRs in panel
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Regions in panel
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This Panel is marked as Retired
Autism
Gene: SETD5 Green List (high evidence)
SETD5 (SET domain containing 5)
EnsemblGeneIds (GRCh38): ENSG00000168137
EnsemblGeneIds (GRCh37): ENSG00000168137
OMIM: 615743, Gene2Phenotype
SETD5 is in 7 panels
EnsemblGeneIds (GRCh38): ENSG00000168137
EnsemblGeneIds (GRCh37): ENSG00000168137
OMIM: 615743, Gene2Phenotype
SETD5 is in 7 panels
1 review
Louise Daugherty (Genomics England Curator)
I don't know
Each gene in the SFARI Human Gene module has a dedicated entry summary page, see here for more info on this gene: https://gene.sfari.org/database/human-gene/SETD5 Gene indicated by SFARI as predisposition to autism in the context of a syndromic disorder. The number of ASD-specific reports that implicate a gene compared to the total number of relevant non-ASD-specific reports that mention the gene. Autism reports / Total reports : 6 / 23Created: 1 Apr 2019, 11:26 a.m.
Created: 1 Apr 2019, 11:26 a.m.
Panel version: 0.11
Panel version: 0.11
Details
- Sources
-
- Expert Review Green
- SFARI
- Phenotypes
-
- ADHD, DD/NDD, ASD
- OMIM
- 615743
- Clinvar variants
- Variants in SETD5
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
1 Apr 2019, Gel status: 4
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene SETD5 were changed from 22495311; 25363760; 26401017; 24680889 to 20212079; 26185613; 23042784; 24267887; 26166478; 25989142; 24090431; 24581740; 26167905; 23999528; 25294932
1 Apr 2019, Gel status: 4
Set Phenotypes
Louise Daugherty (Genomics England Curator)Added phenotypes ADHD, DD/NDD, ASD for gene: SETD5
29 Mar 2019, Gel status: 4
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene SETD5 were changed from to 22495311; 25363760; 26401017; 24680889
29 Mar 2019, Gel status: 3
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source Expert Review Green was added to SETD5. Rating Changed from Red List (low evidence) to Green List (high evidence)
29 Mar 2019, Gel status: 1
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: SETD5 was added gene: SETD5 was added to Autism. Sources: SFARI Mode of inheritance for gene: SETD5 was set to