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Adult onset hereditary spastic paraplegia v1.90 PCYT2 Sarah Leigh Tag for-review was removed from gene: PCYT2.
Adult onset hereditary spastic paraplegia v1.90 PCYT2 Sarah Leigh commented on gene: PCYT2
Adult onset hereditary spastic paraplegia v1.89 PCYT2 Sarah Leigh Source Expert Review Green was added to PCYT2.
Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Adult onset hereditary spastic paraplegia v1.13 PCYT2 Arina Puzriakova changed review comment from: Comment on list classification: The rating of this gene should be reviewed at the next GMS panel update. Based on the review by Rebecca Foulger, there is sufficient evidence to rate this gene Green.; to: Comment on list classification: Changed rating to Amber so that Green genes on this panel reflect the NHS signed-off version. This will be reviewed at the next GMS panel update.
Adult onset hereditary spastic paraplegia v1.8 PCYT2 Arina Puzriakova changed review comment from: Comment on list classification: The rating of this gene should be reviewed at the next GMS panel update.
Based on the review by Rebecca Foulger, there is sufficient evidence to rate this gene Green.; to: Comment on list classification: The rating of this gene should be reviewed at the next GMS panel update. Based on the review by Rebecca Foulger, there is sufficient evidence to rate this gene Green.
Adult onset hereditary spastic paraplegia v1.8 PCYT2 Arina Puzriakova Classified gene: PCYT2 as Amber List (moderate evidence)
Adult onset hereditary spastic paraplegia v1.8 PCYT2 Arina Puzriakova Added comment: Comment on list classification: The rating of this gene should be reviewed at the next GMS panel update.
Based on the review by Rebecca Foulger, there is sufficient evidence to rate this gene Green.
Adult onset hereditary spastic paraplegia v1.8 PCYT2 Arina Puzriakova Gene: pcyt2 has been classified as Amber List (Moderate Evidence).
Adult onset hereditary spastic paraplegia v1.7 PCYT2 Rebecca Foulger Classified gene: PCYT2 as Green List (high evidence)
Adult onset hereditary spastic paraplegia v1.7 PCYT2 Rebecca Foulger Added comment: Comment on list classification: Added to panel as Green for now based on sufficient cases with HSP phenotype in PMID:31637422. Added 'for-review' tag as suggested by Helen Brittain, Genomics England Clinical Team, as this gene requires additional review by GLH as to appropriateness for adult panel.
Adult onset hereditary spastic paraplegia v1.7 PCYT2 Rebecca Foulger Gene: pcyt2 has been classified as Green List (High Evidence).
Adult onset hereditary spastic paraplegia v1.6 PCYT2 Rebecca Foulger Tag for-review tag was added to gene: PCYT2.
Adult onset hereditary spastic paraplegia v1.6 PCYT2 Rebecca Foulger gene: PCYT2 was added
gene: PCYT2 was added to Hereditary spastic paraplegia - adult onset. Sources: Literature
Mode of inheritance for gene: PCYT2 was set to BIALLELIC, autosomal or pseudoautosomal
Publications for gene: PCYT2 were set to 31637422
Phenotypes for gene: PCYT2 were set to Spastic paraplegia 82, autosomal recessive, 618770
Added comment: PMID:31637422. In 5 patients from 4 unrelated families with autosomal recessive spastic paraplegia-82 (MIM:618770), Vaz et al. (2019) identified homozygous or compound heterozygous mutations in the PCYT2 gene. The variants segregated with the disorder in all families. Functional studies showed reduced (not absent) PYCT2 activity.
Sources: Literature