Recurrent episodic apnoea
Gene: SCN1AEnsemblGeneIds (GRCh38): ENSG00000144285
EnsemblGeneIds (GRCh37): ENSG00000144285
OMIM: 182389, Gene2Phenotype
SCN1A is in 13 panels
3 reviews
Arina Puzriakova (Genomics England Curator)
The rating of this gene has been set to Green following NHS Genomic Medicine Service approval.Created: 1 Feb 2023, 2:43 p.m. | Last Modified: 1 Feb 2023, 2:43 p.m.
Panel Version: 0.91
Achchuthan Shanmugasundram (Genomics England Curator)
Comment on classification of gene: This gene should be rated GREEN as this gene has been associated with apnoea in 13 infants from PMID:35696452.
35 patients were studied in PMID:35696452 and the findings were related to Dravet syndrome (MIM #607208) and familial hemiplegic migraine type 3 (MIM #609634) variants. Of these, 13 most severely affected infants were presented with congenital arthrogryposis, neonatal onset epilepsy in the first 3 days of life, tonic seizures and apnoeas, accompanied by a significant movement disorder and profound intellectual disability. Functional studies reveal that these variants result in gain of function.
This gene is associated with relevant phenotypes in both OMIM and G2P.Created: 2 Jan 2023, 10:34 p.m. | Last Modified: 2 Jan 2023, 10:38 p.m.
Panel Version: 0.41
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Developmental and epileptic encephalopathy 6B, non-Dravet, OMIM:619317; Dravet syndrome, OMIM:607208; Febrile seizures, familial, 3A, OMIM:604403; Generalized epilepsy with febrile seizures plus, type 2, OMIM:604403; Migraine, familial hemiplegic, 3, OMIM:609634
Publications
Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Eleanor Williams (Genomics England Curator)
Gene added on recommendation of Dr Emma Matthews.Created: 21 Dec 2022, 2:49 p.m. | Last Modified: 21 Dec 2022, 2:49 p.m.
Panel Version: 0.2
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Green
- Expert list
- Phenotypes
-
- Developmental and epileptic encephalopathy 6B, non-Dravet, OMIM:619317
- Dravet syndrome, OMIM:607208
- Febrile seizures, familial, 3A, OMIM:604403
- Generalized epilepsy with febrile seizures plus, type 2, OMIM:604403
- Migraine, familial hemiplegic, 3, OMIM:609634
- OMIM
- 182389
- Clinvar variants
- Variants in SCN1A
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Hereditary ataxia with onset in adulthood
- Adult onset dystonia, chorea or related movement disorder
- Ataxia and cerebellar anomalies - narrow panel
- Early onset or syndromic epilepsy
- DDG2P
- Arthrogryposis
- Intellectual disability
- Brain channelopathy
- Fetal anomalies
- Familial cerebral small vessel disease
- Paroxysmal central nervous system disorders
- Adult onset neurodegenerative disorder
History Filter Activity
Set Phenotypes
Achchuthan Shanmugasundram (Genomics England Curator)Phenotypes for gene: SCN1A were changed from to Developmental and epileptic encephalopathy 6B, non-Dravet, OMIM:619317; Dravet syndrome, OMIM:607208; Febrile seizures, familial, 3A, OMIM:604403; Generalized epilepsy with febrile seizures plus, type 2, OMIM:604403; Migraine, familial hemiplegic, 3, OMIM:609634
Set publications
Achchuthan Shanmugasundram (Genomics England Curator)Publications for gene: SCN1A were set to
Set mode of pathogenicity
Achchuthan Shanmugasundram (Genomics England Curator)Mode of pathogenicity for gene: SCN1A was changed from to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Set mode of inheritance
Achchuthan Shanmugasundram (Genomics England Curator)Mode of inheritance for gene: SCN1A was changed from to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Entity classified by Genomics England curator
Achchuthan Shanmugasundram (Genomics England Curator)Gene: scn1a has been classified as Green List (High Evidence).
Created, Added New Source, Set mode of inheritance
Eleanor Williams (Genomics England Curator)gene: SCN1A was added gene: SCN1A was added to Reccurent episodic apnoea. Sources: Expert list Mode of inheritance for gene: SCN1A was set to