Cerebral vascular malformations

Gene: NOS3

Amber List (moderate evidence)

NOS3 (nitric oxide synthase 3)
EnsemblGeneIds (GRCh38): ENSG00000164867
EnsemblGeneIds (GRCh37): ENSG00000164867
OMIM: 163729, Gene2Phenotype
NOS3 is in 2 panels

2 reviews

Achchuthan Shanmugasundram (Genomics England Curator)

I don't know

Comment on mode of inheritance: As reviewed by Alexandra Njegic, there are two unrelated cases and some functional evidence available for the association of biallelic variants with MMA. However, there is only one case with monoallelic NOS3 variant. The pathogenicity of this monoallelic variant was not explored in detail in the publication.

Hence, the gene should be rated amber and the MOI should be set to BIALLELIC.

The 'watchlist' tag has been added to review this gene in light of new evidence.
Created: 23 Apr 2025, 10:11 a.m. | Last Modified: 23 Apr 2025, 10:11 a.m.
Panel Version: 3.35
PMID:36941667 analysed six patients from a cohort of 126 consecutive unrelated probands with Moyamoya angiopathy (MMA) of unknown etiology. Two of these six patients were identified with homozygous NOS3 variants, of which one is missense (c.1942T> C, p.(Cys648Arg)) and the other is splice-site variant (c.1502 + 1G > C). Both probands with NOS3 variants suffered from an infant-onset and severe MMA associated with posterior cerebral artery steno-occlusive lesions. There is also some functional evidence available for both variants.

PMID:37383439 reported six patients with Moyamoya disease, of which one patient was identified with monoallelic missense NOS3 variant (c.1684G>A; p.Glu562Lys.
Created: 23 Apr 2025, 10:06 a.m. | Last Modified: 23 Apr 2025, 10:06 a.m.
Panel Version: 3.32

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Moyamoya disease, MONDO:0016820

Publications

Alexandra Njegic (Leeds Teaching Hospital Trust)

I don't know

2 papers with a different mode of inheritance shown; pathogenicity of AD variant not explored in detail.
37383439: 1/6 Moyamoya disease patients with a NOS3 heterozygous variant, pathogenicity not provided.
36941667: 6 probands from consanguineous parentage with MMA, 2 NOS3 homozygous variants. In vitro studies, splice donor site variant leads to lack of eNOS in endothelial progenitor cells derived from the affected proband. Missense variant leads to reduced eNOS protein expression (HEK cells).
Sources: Literature
Created: 8 Apr 2025, 2:55 p.m. | Last Modified: 8 Apr 2025, 2:59 p.m.
Panel Version: 3.20

Mode of inheritance
Other

Phenotypes
Moyamoya Disease; Moyamoya Angiopathy

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
Phenotypes
  • Moyamoya disease, MONDO:0016820
Tags
watchlist
OMIM
163729
Clinvar variants
Variants in NOS3
Penetrance
unknown
Publications
Panels with this gene

History Filter Activity

23 Apr 2025, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: nos3 has been classified as Amber List (Moderate Evidence).

23 Apr 2025, Gel status: 0

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag watchlist tag was added to gene: NOS3.

23 Apr 2025, Gel status: 0

Set mode of inheritance

Achchuthan Shanmugasundram (Genomics England Curator)

Mode of inheritance for gene: NOS3 was changed from Other to BIALLELIC, autosomal or pseudoautosomal

23 Apr 2025, Gel status: 0

Set publications

Achchuthan Shanmugasundram (Genomics England Curator)

Publications for gene: NOS3 were set to 37383439; 36941667

23 Apr 2025, Gel status: 0

Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

Phenotypes for gene: NOS3 were changed from Moyamoya Disease; Moyamoya Angiopathy to Moyamoya disease, MONDO:0016820

8 Apr 2025, Gel status: 0

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

Alexandra Njegic (Leeds Teaching Hospital Trust)

gene: NOS3 was added gene: NOS3 was added to Cerebral vascular malformations. Sources: Literature Mode of inheritance for gene: NOS3 was set to Other Publications for gene: NOS3 were set to 37383439; 36941667 Phenotypes for gene: NOS3 were set to Moyamoya Disease; Moyamoya Angiopathy Penetrance for gene: NOS3 were set to unknown Review for gene: NOS3 was set to AMBER