Hereditary Erythrocytosis

Gene: JAK2

Green List (high evidence)

JAK2 (Janus kinase 2)
EnsemblGeneIds (GRCh38): ENSG00000096968
EnsemblGeneIds (GRCh37): ENSG00000096968
OMIM: 147796, Gene2Phenotype
JAK2 is in 7 panels

3 reviews

Anna Godfrey (Cambridge University Hospitals NHS Foundation Trust)

Green List (high evidence)

Pathogenic variants have an activating effect on JAK2.
Additional published evidence since the original review. Papers have demonstrated segregation of germline variants with an erythrocytosis phenotype and increased activity of JAK2 / downstream pathways, which is the known mechanism of action for JAK2 mutations causing erythrocytosis in acquired polycythaemia vera.
Created: 24 Nov 2024, 6:55 p.m. | Last Modified: 24 Nov 2024, 6:55 p.m.
Panel Version: 2.6

Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted

Phenotypes
Hereditary erythrocytosis

Publications

Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments

Arina Puzriakova (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance updated to BOTH monoallelic and biallelic, autosomal or pseudoautosomal following NHS Genomic Medicine Service approval.
Created: 10 Dec 2025, 2:38 p.m. | Last Modified: 10 Dec 2025, 2:38 p.m.
Panel Version: 2.15
There is limited evidence to support an association of JAK2 variants with hereditary/congenital erythrocytosis. Typically, variants are somatic/acquired; and to date, only one report has described a patient with germline compound het variants (p.E846D and p.R1063H) in JAK2, who exhibited polyclonal erythrocytosis and megakaryocytic atypia but normal platelet number (PMID:27389715).

Note that this condition is distinct from polycythemia vera (PV), which is most commonly associated with JAK2 gain-of-function somatic variants, particularly p.V617F, but also with reports of some familial clustering due to inheritance of the JAK2 46/1 predisposition haplotype. Unlike PV, hereditary erythrocytosis is not associated with the risk of clonal evolution and should present with isolated erythrocytosis, often present since birth.
Created: 25 Sep 2020, 10:56 a.m. | Last Modified: 25 Sep 2020, 10:56 a.m.
Panel Version: 1.14

Mode of inheritance
Other

Phenotypes
Erythrocytosis, somatic, 133100

Publications

Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments

Sarah Leigh (Genomics England Curator)

Green List (high evidence)

At least four JAK2 variants have been associated with Hereditary erythrocytosis (PMID: 38629639; 37639050; 27389715). Three biallelic JAK2 variants have been reported in two unrelated cases (one case being compound heterozygous PMID: 27389715, and the other being homozygous (PMID: 37639050), the forth variant occurs as a heterozygote in the proband, her mother and daughter (PMID: 38629639). All of these four variants have a hyperactivating effect on JAK2/STAT5 signaling pathway (PMID: 38629639; 37639050; 27389715).
Created: 31 Mar 2025, 3:24 p.m. | Last Modified: 31 Mar 2025, 3:27 p.m.
Panel Version: 2.11
Comment on mode of pathogenicity: Functional studies demonstrate that the missense JAK2 variants reported in PMID: 38629639; 37639050; 27389715 all have a gain of funtion.
Created: 31 Mar 2025, 3:13 p.m. | Last Modified: 31 Mar 2025, 3:13 p.m.
Panel Version: 2.10
Comment on list classification: An amber rating has been given to JAK2, as only somatic variants in this gene have been reported to be associated with Erythrocytosis, somatic 133100.
Created: 22 Sep 2020, 3:11 p.m. | Last Modified: 22 Sep 2020, 3:11 p.m.
Panel Version: 1.12
GMS Expert review Green
Sources: Expert review, NHS GMS
Created: 18 Aug 2020, 4:26 p.m. | Last Modified: 18 Aug 2020, 4:35 p.m.
Panel Version: 1.8

Mode of inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal

Phenotypes
Hereditary erythrocytosis

Mode of pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments

Details

Mode of Inheritance
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Expert list
Phenotypes
  • Hereditary erythrocytosis
  • Erythrocytosis, somatic, OMIM:133100
Tags
somatic
OMIM
147796
Clinvar variants
Variants in JAK2
Penetrance
None
Publications
Mode of Pathogenicity
Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments
Panels with this gene

History Filter Activity

10 Dec 2025, Gel status: 3

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: JAK2 were changed from Hereditary erythrocytosis to Hereditary erythrocytosis; Erythrocytosis, somatic, OMIM:133100

10 Dec 2025, Gel status: 3

Removed Tag, Removed Tag

Arina Puzriakova (Genomics England Curator)

Tag Q1_25_ NHS_review was removed from gene: JAK2. Tag Q1_25_ promote_green was removed from gene: JAK2.

10 Dec 2025, Gel status: 3

Added New Source, Status Update

Arina Puzriakova (Genomics England Curator)

Source Expert Review Green was added to JAK2. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

1 Jul 2025, Gel status: 2

Removed Tag

Arina Puzriakova (Genomics England Curator)

Tag Q1_25_ MOI was removed from gene: JAK2.

31 Mar 2025, Gel status: 2

Added Tag, Added Tag, Added Tag

Sarah Leigh (Genomics England Curator)

Tag Q1_25_ NHS_review tag was added to gene: JAK2. Tag Q1_25_ MOI tag was added to gene: JAK2. Tag Q1_25_ promote_green tag was added to gene: JAK2.

31 Mar 2025, Gel status: 2

Set mode of inheritance

Sarah Leigh (Genomics England Curator)

Mode of inheritance for gene: JAK2 was changed from Other to BOTH monoallelic and biallelic, autosomal or pseudoautosomal

31 Mar 2025, Gel status: 2

Set mode of pathogenicity

Sarah Leigh (Genomics England Curator)

Mode of pathogenicity for gene: JAK2 was changed from Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments

31 Mar 2025, Gel status: 2

Set Phenotypes

Sarah Leigh (Genomics England Curator)

Phenotypes for gene: JAK2 were changed from Erythrocytosis, somatic, OMIM:133100; primary familial polycythemia due to EPO receptor mutation, MONDO:0007572 to Hereditary erythrocytosis

31 Mar 2025, Gel status: 2

Set Phenotypes

Sarah Leigh (Genomics England Curator)

Phenotypes for gene: JAK2 were changed from Erythrocytosis, somatic, OMIM:133100 to Erythrocytosis, somatic, OMIM:133100; primary familial polycythemia due to EPO receptor mutation, MONDO:0007572

31 Mar 2025, Gel status: 2

Set publications

Sarah Leigh (Genomics England Curator)

Publications for gene: JAK2 were set to

23 Mar 2021, Gel status: 2

Set Phenotypes

Arina Puzriakova (Genomics England Curator)

Phenotypes for gene: JAK2 were changed from Erythrocytosis, somatic 133100 to Erythrocytosis, somatic, OMIM:133100

30 Sep 2020, Gel status: 2

Removed Tag

Arina Puzriakova (Genomics England Curator)

Tag for-review was removed from gene: JAK2.

25 Sep 2020, Gel status: 2

Set mode of pathogenicity

Arina Puzriakova (Genomics England Curator)

Mode of pathogenicity for gene: JAK2 was changed from None to Loss-of-function variants (as defined in pop up message) DO NOT cause this phenotype - please provide details in the comments

25 Sep 2020, Gel status: 2

Set mode of inheritance

Arina Puzriakova (Genomics England Curator)

Mode of inheritance for gene: JAK2 was changed from Unknown to Other

22 Sep 2020, Gel status: 2

Added Tag

Sarah Leigh (Genomics England Curator)

Tag for-review tag was added to gene: JAK2.

22 Sep 2020, Gel status: 2

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: jak2 has been classified as Amber List (Moderate Evidence).

18 Aug 2020, Gel status: 3

Entity classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

Gene: jak2 has been classified as Green List (High Evidence).

18 Aug 2020, Gel status: 1

Created, Added New Source, Added Tag, Set mode of inheritance, Set Phenotypes

Sarah Leigh (Genomics England Curator)

gene: JAK2 was added gene: JAK2 was added to Hereditary Erythrocytosis. Sources: Expert list,NHS GMS somatic tags were added to gene: JAK2. Mode of inheritance for gene: JAK2 was set to Unknown Phenotypes for gene: JAK2 were set to Erythrocytosis, somatic 133100 Review for gene: JAK2 was set to GREEN