1. Panels
  2. Hereditary ataxia
  3. VPS53

Hereditary ataxia

Gene: VPS53

Red List (low evidence)
VPS53 (VPS53, GARP complex subunit)
EnsemblGeneIds (GRCh38): ENSG00000141252
EnsemblGeneIds (GRCh37): ENSG00000141252
OMIM: 615850, Gene2Phenotype
VPS53 is in 9 panels

2 reviews

Richard Scott (Genomics England Curator)

Comment on list classification: Await further data before promote to green - single pair of variants in one population reported to date
Created: 11 Jul 2016, 9:08 p.m.
Created: 11 Jul 2016, 9:08 p.m.

Panel version: 0.125

Jonathan Williams (Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust)

Green List (high evidence)

Fine. PCH2E, reasonable evidence
Created: 24 Nov 2015, 4:57 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Pontocerebellar hypoplasia 2E (#615851)

Variants in this GENE are reported as part of current diagnostic practice

Created: 24 Nov 2015, 4:57 p.m.

Panel version: 0

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Red
Phenotypes
  • Pontocerebellar hypoplasia 2E (#615851)
OMIM
615850
Clinvar variants
Variants in VPS53
Penetrance
Complete
Publications
Panels with this gene

History Filter Activity

11 Jul 2016, Gel status: 1

Set publications

Richard Scott (Genomics England Curator)

Publications for VPS53 were set to 24577744

11 Jul 2016, Gel status: 1

Gene classified by Genomics England curator

Richard Scott (Genomics England Curator)

This gene has been classified as Red List (Low Evidence).

24 Nov 2015, Gel status: 0

Added New Source

Jonathan Williams (Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust)

VPS53 was added to Hereditary ataxiapanel. Sources: Expert Review

24 Nov 2015, Gel status: 0

Created

Jonathan Williams (Oxford Medical Genetics Laboratories, Oxford University Hospitals NHS Foundation Trust)

VPS53 was created by jonathan.williams