Congenital myopathy
Gene: STIM1EnsemblGeneIds (GRCh38): ENSG00000167323
EnsemblGeneIds (GRCh37): ENSG00000167323
OMIM: 605921, Gene2Phenotype
STIM1 is in 12 panels
5 reviews
Louise Daugherty (Genomics England Curator)
Gene rating and review submitted by Rachael Mein, Viapath Guy's Hospital February 2019 on on behalf of London South GLH for the GMS Neurology specialist test group.Created: 30 Apr 2019, 10:09 a.m.
Rachael Mein (Viapath at Guy's Hospital)
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Myopathy, tubular aggregate, 160565
Publications
Variants in this GENE are reported as part of current diagnostic practice
Sarah Leigh (Genomics England Curator)
Monoallelic missense variants consistent with a gain-of-function effect in Myopathy, tubular aggregate, 1 160565Created: 4 Jan 2018, 1:48 p.m.
Mode of pathogenicity
Other
Anna Sarkozy (Great Ormond Street Hospital)
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Myopathy, tubular aggregate, 160565
Publications
Helen Brittain (Genomics England Curator)
Comment when marking as ready: Variable expressivity in terms of age of onset noted. Activating missense.Created: 3 Feb 2017, 11:32 a.m.
Comment on list classification: 4 families with mainly childhood onset reported. Although some presented later (could be relevant to apparently unaffected parent)Created: 3 Feb 2017, 11:25 a.m.
There are four families in the above PMID; all of which are reported as having missense mutations in an activating capacity. The phenotype is associated with histological features of membrane tubules (not in the inclusion criteria) and on the whole childhood onset, although within families adolescent / adult onset is reported.Created: 30 Jan 2017, 11:55 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Phenotypes
Myopathy, tubular aggregate, 1 160565
Publications
- PMID 23332920
Mode of pathogenicity
Other
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- NHS GMS
- London South GLH
- Expert Review Green
- Expert
- UKGTN
- Radboud University Medical Center, Nijmegen
- Phenotypes
-
- Myopathy, tubular aggregate, 1, OMIM:160565
- Tags
- OMIM
- 605921
- Clinvar variants
- Variants in STIM1
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Cytopenia - NOT Fanconi anaemia
- Amelogenesis imperfecta
- Non-syndromic familial congenital anorectal malformations
- Primary immunodeficiency or monogenic inflammatory bowel disease
- Bleeding and platelet disorders
- DDG2P
- Fetal anomalies
- Congenital myopathy
- Limb girdle muscular dystrophies, myofibrillar myopathies and distal myopathies
- Arthrogryposis
- Inherited bleeding disorders
- COVID-19 research
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: STIM1 were changed from Myopathy, tubular aggregate, 160565 to Myopathy, tubular aggregate, 1, OMIM:160565
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to STIM1.
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source London South GLH was added to STIM1. Rating Changed from Green List (high evidence) to Green List (high evidence)
panel promoted to version 1
Helen Brittain (Genomics England Curator)Promoted 22/02/2017 after curation discussion and further review with members of the Genomics England curation team. Participants who are offered this panel will automatically be offered the following three panels: 1) Congenital muscular dystrophy 2) Congenital myasthenia and 3) Paediatric motor neuronopathy as this will cover a large range of differentials for a weak infant, for where the strict inclusion criteria are not applicable in view of the availability of muscle biopsy testing in peripheral paediatric units.
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Helen Brittain (Genomics England Curator)Phenotypes for STIM1 were set to Myopathy, tubular aggregate, 160565
Set publications
Helen Brittain (Genomics England Curator)Publications for STIM1 were set to 23332920
Set Mode of Inheritance
Helen Brittain (Genomics England Curator)Mode of inheritance for STIM1 was changed to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Gene classified by Genomics England curator
Helen Brittain (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Eik Haraldsdottir (Genomics England)STIM1 was added to Congenital myopathypanel. Sources: Expert
Added New Source
GEL ()STIM1 was added to Congenital myopathypanel. Sources: UKGTN
Added New Source
GEL ()STIM1 was added to Congenital myopathypanel. Sources: Radboud University Medical Center, Nijmegen