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Genomic imprinting

Gene: MCTS2P

Red List (low evidence)

MCTS2P (malignant T-cell amplified sequence 2, pseudogene)
EnsemblGeneIds (GRCh38): ENSG00000101898
EnsemblGeneIds (GRCh37): ENSG00000101898
MCTS2P is in 0 panels

1 review

Sarah Leigh (Genomics England Curator)

I don't know

MCTS2P (PSIMCT-1, MCTS1 pseudogene; referred to as MCTS2 (malignant T cell amplified sequence 2) by Wood et al.) was exclusively expressed from the paternal allele in fetal brain, heart and tongue in one informative fetus, and monoallelically expressed in two additional fetuses (same tissues) (Wood AJ et al, 2007). Mouse Mcts2 is also imprinted and paternally expressed. PSIMCT-1 is reported to be a pseudogene derived from the X chromosome gene MCTS1/Mcts1 (Nandi S et al, 2006). Despite 15 nucleotide differences the 181 aa open reading frame is conserved with 95% identity to MCTS1. Thus Wood et al. believe it to be a functional retrogene. PSIMCT-1 retrotransposed into intron 4 of HM13/H13 of mouse and human. It is absent in the genome of cow and dog.
Created: 22 Dec 2020, 6:10 p.m. | Last Modified: 22 Dec 2020, 6:10 p.m.
Panel Version: 0.26

Details

Mode of Inheritance
MONOALLELIC, autosomal or pseudoautosomal, maternally imprinted (paternal allele expressed)
Sources
  • Literature
Clinvar variants
Variants in MCTS2P
Penetrance
None
Publications
Panels with this gene

History Filter Activity

22 Dec 2020, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications

Sarah Leigh (Genomics England Curator)

gene: MCTS2P was added gene: MCTS2P was added to Imprinted Genes. Sources: Literature Mode of inheritance for gene: MCTS2P was set to MONOALLELIC, autosomal or pseudoautosomal, maternally imprinted (paternal allele expressed) Publications for gene: MCTS2P were set to 17291163; http://igc.otago.ac.nz/home.html; 30794780; 16815567