Severe hypertriglyceridaemia
Gene: LMF1EnsemblGeneIds (GRCh38): ENSG00000103227
EnsemblGeneIds (GRCh37): ENSG00000103227
OMIM: 611761, Gene2Phenotype
LMF1 is in 4 panels
3 reviews
Sarah Leigh (Genomics England Curator)
Comment on list classification: PMID 17994020 and 19820022, both report homozygous terminating variants in severe hypertriglyceridemia, together with functional studies that showed significant reduction of LPL activity. PMID 30885219: heterozygous LMF1 c.1024C > T (p.Arg342*; rs776584760) in a patient with Hypertriglyceridemia and acute pancreatitis (HTG-AP). PMID: 30420299 reports at least 2 likely pathogenic (terminating variants) heterozygous LMF1 variants from 13 variants in severe hypertriglyceridemia patients. PMID: 29910226 reports a compound heterozygous variants (c.257C>T, p.P86L & c.1184C>T,p.T395I) which segrates with hypertriglyceridemia in the family. However PMID: 22239554 reports that a number of missense variants don't have an effect.Created: 23 Jul 2019, 11:05 a.m. | Last Modified: 23 Jul 2019, 11:05 a.m.
Panel Version: 1.11
Comment when marking as ready: Associated with phenotype in OMIM, not in G2P. At least 2 variants reportedCreated: 4 May 2017, 3:04 p.m.
steve Humphries (UCL)
RareCreated: 4 May 2017, 9:01 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Variants in this GENE are reported as part of current diagnostic practice
Ellen McDonagh (Genomics England Curator)
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Lipase deficiency, combined
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- UKGTN
- Eligibility statement prior genetic testing
- Phenotypes
-
- Lipase deficiency, combined, 246650
- OMIM
- 611761
- Clinvar variants
- Variants in LMF1
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: LMF1 were set to
Entity classified by Genomics England curator
Sarah Leigh (Genomics England Curator)Gene: lmf1 has been classified as Green List (High Evidence).
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Review added and all genes checked
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for LMF1 were set to Lipase deficiency, combined, 246650
Added New Source
Olivia Niblock (Genomics England Curator)LMF1 was added to Severe hypertriglyceridaemiapanel. Source: UKGTN
Created
Ellen McDonagh (Genomics England Curator)LMF1 was created by ellenmcdonagh
Added New Source
Ellen McDonagh (Genomics England Curator)LMF1 was added to Severe hypertriglyceridaemiapanel. Sources: Eligibility statement prior genetic testing