Cerebellar hypoplasia
Gene: TSEN34EnsemblGeneIds (GRCh38): ENSG00000170892
EnsemblGeneIds (GRCh37): ENSG00000170892
OMIM: 608754, Gene2Phenotype
TSEN34 is in 11 panels
4 reviews
Ida Ertmanska (Genomics England Curator)
Comment on list classification: There is only one patient reported in literature with a biallelic variant in TSEN34 and Pontocerebellar hypoplasia type 2 (PMID: 20952379 Namavar et al., 2011). While TSEN34 shares a biochemical function with other genes known to cause Pontocerebellar hypoplasia type 2, the clinical evidence for this gene-disease association is lacking in literature (see literature review on Intellectual disability panel). Hence, TSEN34 should be demoted from Green, until more evidence emerges.Created: 31 Dec 2025, 11:06 a.m. | Last Modified: 31 Dec 2025, 11:06 a.m.
Panel Version: 1.84
Zornitza Stark (Australian Genomics)
Although a very good candidate gene from a biological perspective, I can only find one family reported in the literature.Created: 21 Apr 2020, 1:41 a.m. | Last Modified: 21 Apr 2020, 1:41 a.m.
Panel Version: 1.39
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Pontocerebellar hypoplasia type 2C 612390
Publications
Alice Gardham (Genomics England)
Comment on list classification: Offered on UKGTN and GOSH PCH panelCreated: 14 Nov 2016, 10:41 a.m.
TSEN54 is part of a tRNA splicing endonuclease complex consisting of four subunits: TSEN2, TSEN15, TSEN34 and TSEN54. TSEN54 mutations known to cause PCH. Only one report of TSEN34 mutations causing PCH. Offered as diagnostic test by UKGTN and probable DD on G2P.Created: 3 Nov 2016, 9:46 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Gene added by reviewer, and found in 3/4 sources.Created: 19 May 2016, 8:53 a.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Amber
- Illumina TruGenome Clinical Sequencing Services
- Radboud University Medical Center, Nijmegen
- UKGTN
- Phenotypes
-
- Pontocerebellar hypoplasia type 2C, OMIM:612390
- pontocerebellar hypoplasia type 2C, MONDO:0012891
- OMIM
- 608754
- Clinvar variants
- Variants in TSEN34
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Childhood onset dystonia, chorea or related movement disorder
- Hereditary ataxia with onset in adulthood
- Ataxia and cerebellar anomalies - narrow panel
- Early onset or syndromic epilepsy
- DDG2P
- Cerebellar hypoplasia
- Arthrogryposis
- Intellectual disability
- Hereditary ataxia
- Fetal anomalies
- Adult onset neurodegenerative disorder
History Filter Activity
Set Phenotypes
Ida Ertmanska (Genomics England Curator)Phenotypes for gene: TSEN34 were changed from Pontocerebellar Hypoplasia type 2C; Pontocerebellar Hypoplasia; Pontocerebellar hypoplasia type 2C,612390 to Pontocerebellar hypoplasia type 2C, OMIM:612390; pontocerebellar hypoplasia type 2C, MONDO:0012891
Set publications
Ida Ertmanska (Genomics England Curator)Publications for gene: TSEN34 were set to PMID: 18711368
Entity classified by Genomics England curator
Ida Ertmanska (Genomics England Curator)Gene: tsen34 has been classified as Amber List (Moderate Evidence).
panel promoted to version 1
Ellen McDonagh (Genomics England Curator)22/02/2017: Panel revised after internal clinical review and further curation.
Gene classified by Genomics England curator
Alice Gardham (Genomics England)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Alice Gardham (Genomics England)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Alice Gardham (Genomics England)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Approved Gene
Ellen McDonagh (Genomics England Curator)This proposed gene was validated and added to this panel
Added New Source
Ellen McDonagh (Genomics England Curator)TSEN34 was added to Cerebellar hypoplasiapanel. Source: Illumina TruGenome Clinical Sequencing Services
Added New Source
Ellen McDonagh (Genomics England Curator)TSEN34 was added to Cerebellar hypoplasiapanel. Source: Radboud University Medical Center, Nijmegen
Added New Source
Ellen McDonagh (Genomics England Curator)TSEN34 was added to Cerebellar hypoplasiapanel. Source: UKGTN
Added New Source
Helen Savage (Congenica Ltd)TSEN34 was added to Cerebellar hypoplasiapanel. Sources: Literature,Other
Created
Helen Savage (Congenica Ltd)TSEN34 was created by helen.savage