Neonatal cholestasis
Gene: ADKEnsemblGeneIds (GRCh38): ENSG00000156110
EnsemblGeneIds (GRCh37): ENSG00000156110
OMIM: 102750, Gene2Phenotype
ADK is in 4 panels
2 reviews
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)
Comment on list classification: There are 18 reported cases in 13 unrelated families of homozygous or compound heterozygous variants in this gene associated with hypermethioninaemia and (in most cases) conjugated hyperbilirubinaemia; liver biopsy in 4 cases demonstrated cholestasis. Some cases responded to methionine restriction, justifying the 'treatable' tag.Created: 27 Jul 2018, 5:07 a.m.
Comment on publications: In PMID:26642971, in 9/11 cases, first presentation was usually with severe or prolonged conjugated hyperbilirubinaemia and hypoglycaemia; all patients except patients 9 and 10 (family VII) had intermittent increases of liver enzymes and/or cholestasis. Although this led the authors to conclude that ‘hepatic involvement is not a constant finding’, note that family VII were homozygous for a variant that has been classified as a VUS in ClinVar.Created: 27 Jul 2018, 4:52 a.m.
Ellen McDonagh (Genomics England Curator)
Comment on list classification: More than 3 unrelated cases/families reported with homozygous variants in this gene and Hypermethioninemia due to adenosine kinase deficiency. In PMID: 21963049 liver biopsies for 4 cases revealed cholestasis in 3 cases. For the Swedish sublings reported, both were investigated for failure to thrive in the neonatal period and the older brother was also investigated for prolonged conjugated hyperbilirubinemia. Reduced activity was displayed in vitro assays with the variants identified compared to wild type.Created: 25 Jul 2018, 3:39 p.m.
Comment on publications: PMID: 27500280 - a case report of a 3-year old girl with a history of poor feeding, irritability, respiratory infections, cholestasis, congenital heart disease, neurodevelopmental delay, hypotonia, sparse hair, facial dysmorphisms, liver dysfunction, severe hypermethioninemia and mild homocystinemia. Added the 'treatable' tag as a methionine-restricted diet normalized the liver function test results and improved her hypotonia.Created: 25 Jul 2018, 3:27 p.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Victorian Clinical Genetics Services
- Phenotypes
-
- Hypermethioninemia due to adenosine kinase deficiency 614300
- Tags
- OMIM
- 102750
- Clinvar variants
- Variants in ADK
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Panel promoted to version 1.0
Sarah Leigh (Genomics England Curator)This panel has been subjected to extensive internal and external review.
Set mode of inheritance
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)Mode of inheritance for gene: ADK was changed from to BIALLELIC, autosomal or pseudoautosomal
Entity classified by Genomics England curator
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)Gene: adk has been classified as Green List (High Evidence).
Entity classified by Genomics England curator
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)Gene: adk has been classified as Green List (High Evidence).
Set publications
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)Publications for gene: ADK were set to 27500280; 21963049; 26642971
Set publications
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)Publications for gene: ADK were set to 27500280; 21963049; 26642971
Set publications
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)Publications for gene: ADK were set to 27500280; 21963049; 26642971
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: adk has been classified as Amber List (Moderate Evidence).
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: ADK were set to 27500280; 21963049
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for gene: ADK were set to Hypermethioninemia due to adenosine kinase deficiency 614300
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: ADK were set to 27500280
Set publications
Ellen McDonagh (Genomics England Curator)Publications for gene: ADK were set to 27500280
Added New Source
Ellen McDonagh (Genomics England Curator)ADK was added to Cholestasis panel. Sources: Victorian Clinical Genetics Services
Created
Ellen McDonagh (Genomics England Curator)ADK was created by Ellen McDonagh