Intellectual disability update Jan 2018

Gene: GPAA1

Green List (high evidence)

GPAA1 (glycosylphosphatidylinositol anchor attachment 1)
EnsemblGeneIds (GRCh38): ENSG00000197858
EnsemblGeneIds (GRCh37): ENSG00000197858
OMIM: 603048, Gene2Phenotype
GPAA1 is in 9 panels

2 reviews

Helen Brittain (Genomics England Curator)

Comment when marking as ready: Sufficient cases, phenotype appropriate for this panel.
Created: 6 Mar 2018, 4:54 p.m.

Sarah Leigh (Genomics England Curator)

Associated with phenotype in OMIM. At least 7 variants reported in 10 patients from 5 unrelated families with Glycosylphosphatidylinositol biosynthesis defect 15 (617810). The patients ranged in age from 3.8 to 30 years. All had mild to moderate intellectual disability, together with other features of developmental delay.
Reported as an ID candidate gene (Gilessen 2014, PMID 24896178)
Created: 5 Mar 2018, 3:49 p.m.

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Other
Phenotypes
  • Glycosylphosphatidylinositol biosynthesis defect 15 617810
OMIM
603048
Clinvar variants
Variants in GPAA1
Penetrance
None
Publications
Panels with this gene

History Filter Activity

6 Mar 2018, Gel status: 3

Gene classified by Genomics England curator

Helen Brittain (Genomics England Curator)

This gene has been classified as Green List (High Evidence).

5 Mar 2018, Gel status: 3

Set publications

Sarah Leigh (Genomics England Curator)

Publications for GPAA1 were set to 29100095; 24896178

5 Mar 2018, Gel status: 3

Gene classified by Genomics England curator

Sarah Leigh (Genomics England Curator)

This gene has been classified as Green List (High Evidence).

5 Mar 2018, Gel status: 1

Set publications

Sarah Leigh (Genomics England Curator)

Publications for GPAA1 were set to 29100095

5 Mar 2018, Gel status: 1

Set mode of inheritance

Sarah Leigh (Genomics England Curator)

Mode of inheritance for GPAA1 was changed from to BIALLELIC, autosomal or pseudoautosomal

5 Mar 2018, Gel status: 1

Set Phenotypes

Sarah Leigh (Genomics England Curator)

Phenotypes for GPAA1 were set to Glycosylphosphatidylinositol biosynthesis defect 15 617810

18 Dec 2017, Gel status: 1

Added New Source

Ellen McDonagh (Genomics England Curator)

GPAA1 was added to Intellectual disability update Jan 2018 panel. Sources: Other

18 Dec 2017, Gel status: 1

Created

Ellen McDonagh (Genomics England Curator)

GPAA1 was created by Ellen McDonagh