Albinism or congenital nystagmus
Gene: BLOC1S5EnsemblGeneIds (GRCh38): ENSG00000188428
EnsemblGeneIds (GRCh37): ENSG00000188428
OMIM: 607289, Gene2Phenotype
BLOC1S5 is in 3 panels
2 reviews
Ivone Leong (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 3 Mar 2022, 4:42 p.m. | Last Modified: 3 Mar 2022, 4:42 p.m.
Panel Version: 1.22
Comment on list classification: New gene added by Simon Ramsden (NHS). This gene is not associated with a phenotype in OMIM or Gene2Phenotype.
PMID: 32565547 describes 2 unrelated cases of patients with homozygous variants in BLOC1S5. Patients had mild oculocutaneous albinism, moderate bleeding diathesis, platelet aggregation deficit, and a dramatically decreased number of platelet dense granules. The paper also includes a mouse model.
Based on the available information there is enough evidence to support a gene-disease association. This gene should be rated Green at the next review.Created: 26 Jan 2021, 10:24 a.m. | Last Modified: 26 Jan 2021, 10:24 a.m.
Panel Version: 1.13
Simon Ramsden (NHS)
This is a newly described gen association and should be considered for inclusion in the Albinism panel
Sources: NHS GMSCreated: 25 Jan 2021, 4:34 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Hermansky-Pudlak syndrome
Publications
- PMID 32565547
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Phenotypes
-
- Hermansky-Pudlak syndrome, MONDO:0019312
- OMIM
- 607289
- Clinvar variants
- Variants in BLOC1S5
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
Removed Tag
Ivone Leong (Genomics England Curator)Tag for-review was removed from gene: BLOC1S5.
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Green was added to BLOC1S5. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: bloc1s5 has been classified as Amber List (Moderate Evidence).
Added Tag
Ivone Leong (Genomics England Curator)Tag for-review tag was added to gene: BLOC1S5.
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: BLOC1S5 were changed from Hermansky-Pudlak syndrome to Hermansky-Pudlak syndrome, MONDO:0019312
Set publications
Ivone Leong (Genomics England Curator)Publications for gene: BLOC1S5 were set to PMID 32565547
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance
Simon Ramsden (NHS)gene: BLOC1S5 was added gene: BLOC1S5 was added to Albinism or congenital nystagmus. Sources: NHS GMS Mode of inheritance for gene: BLOC1S5 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: BLOC1S5 were set to PMID 32565547 Phenotypes for gene: BLOC1S5 were set to Hermansky-Pudlak syndrome Penetrance for gene: BLOC1S5 were set to Complete Review for gene: BLOC1S5 was set to GREEN