Ehlers Danlos syndrome with a likely monogenic cause
Gene: AEBP1EnsemblGeneIds (GRCh38): ENSG00000106624
EnsemblGeneIds (GRCh37): ENSG00000106624
OMIM: 602981, Gene2Phenotype
AEBP1 is in 1 panel
5 reviews
Ivone Leong (Genomics England Curator)
Comment on phenotypes: Previous phenotypes:
Ehlers-Danlos syndrome type;EDS type;Part of the EDS spectrumCreated: 18 Mar 2021, 1:16 p.m. | Last Modified: 18 Mar 2021, 1:16 p.m.
Panel Version: 2.6
Duncan Baker (Sheffield Genetics)
Eleanor Williams (Genomics England Curator)
This gene was part of an initial gene list collated by Duncan Baker, Sheffield Diagnostic Genetics Service, January 2019 on behalf of the GMS Musculoskeletal Specialist Group; Gene symbol submitted: AEBP1; Suggested initial gene rating: greenCreated: 3 Apr 2019, 3:41 p.m.
Louise Daugherty (Genomics England Curator)
Comment on list classification: Changed from Amber to Green due to external clinical reviewCreated: 18 Apr 2018, 9:29 a.m.
Re: PMID:29606302 (2018). Feedback via email from combined external expert review Neeti Ghali, Angela Brady and Fleur Dijk (LONDON NORTH WEST UNIVERSITY HEALTHCARE NHS TRUST) agree this gene should be rated Green on this panel. They also noted that the specific EDS classification type is not clear, as the authors of the article (extremely well-known in the EDS field) conclude at present for it to be a disorder part of the EDS spectrum. This is because the clinical phenotype in affected individuals overlaps with several subtypes, mostly classical, vascular and arthrochalasia subtype but also kyphoscoliotic and this is because there is the presence of both major and minor criteria for these subtypes: severe joint and skin laxity, osteoporosis, osteoarthritis, soft redundant skin, delayed wound healing with abnormal atrophic scarring and dislocations.Created: 18 Apr 2018, 9:27 a.m.
Re: PMID:29606302 (2018). Feedback via email from external expert Antony Vandersteen (IWK Health Center and Dalhousie University, Nova Scotia, Canada ) agrees this gene should be rated Green on this panel, since the clinical, molecular, histological and biochemical findings support EDS phenotypeCreated: 18 Apr 2018, 9:26 a.m.
Comment on list classification: Changed from Green to Amber until we have external clinical review of this gene being associated to EDS. The evidence in PMID: 29606302 is strong but as new EDS gene it would be good to get expert opinion.Created: 3 Apr 2018, 4:10 p.m.
Comment on publications: added PMID 29606302Created: 3 Apr 2018, 4:07 p.m.
Sarah Leigh (Genomics England Curator)
Comment on list classification: Awaiting confirmation from EDS expert reviewersCreated: 3 Apr 2018, 4:40 p.m.
Comment on publications: PMID not available to dateCreated: 3 Apr 2018, 3:41 p.m.
Not associated with phenotype in OMIM nor Gen2Phen. Four variants reported in three unrelated cases (two as compound heterozygotes and two as homozygotes). All four variants are likely pathogenic (3 truncating and 1 splicing) and the authors provide functional studies stating that "ACLP enhances collagen polymerization and binds to several fibrillar collagens via its discoidin domain", they also state that "bi-allelic pathogenic variants in AEBP1 cause the particular autosomal-recessive EDS subtype reported in this article. (Sub-type to be confirmed but the EDS community)Created: 3 Apr 2018, 3:40 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
autosomal-recessive EDS subtype
Publications
- https://doi-org.ezproxy.library.qmul.ac.uk/10.1016/j.ajhg.2018.02.018
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- NHS GMS
- Expert Review Green
- Literature
- Phenotypes
-
- Ehlers-Danlos syndrome, classic-like, 2, OMIM:618000
- OMIM
- 602981
- Clinvar variants
- Variants in AEBP1
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Ivone Leong (Genomics England Curator)Phenotypes for gene: AEBP1 were changed from Ehlers-Danlos syndrome type; EDS type; Part of the EDS spectrum to Ehlers-Danlos syndrome, classic-like, 2, OMIM:618000
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to AEBP1. Rating Changed from Green List (high evidence) to Green List (high evidence)
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for AEBP1 were set to Ehlers-Danlos syndrome type; EDS type; Part of the EDS spectrum
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for AEBP1 were set to Ehlers-Danlos syndrome type; EDS type
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Gene classified by Genomics England curator
Louise Daugherty (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Set publications
Louise Daugherty (Genomics England Curator)Publications for AEBP1 were set to 29606302
Set publications
Sarah Leigh (Genomics England Curator)Publications for AEBP1 were set to https://doi-org.ezproxy.library.qmul.ac.uk/10.1016/j.ajhg.2018.02.018
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Added New Source
Sarah Leigh (Genomics England Curator)AEBP1 was added to Ehlers-Danlos syndromes panel. Sources: Literature
Created
Sarah Leigh (Genomics England Curator)AEBP1 was created by Sarah Leigh