Mitochondrial disorder with complex V deficiency
Gene: ATP5BEnsemblGeneIds (GRCh38): ENSG00000110955
EnsemblGeneIds (GRCh37): ENSG00000110955
OMIM: 102910, Gene2Phenotype
ATP5B is in 4 panels
6 reviews
Sarah Leigh (Genomics England Curator)
In the opinion of Helen Brittain (Clinical Fellow, Genomics England) is "There is a lack of clarity over the penetrance, plus also the phenotypes are somewhat disparate (the twins had DD with episodic hyperthermia, whereas the other cases presented with dystonia). A gene:disease association cannot be made at this time".Created: 23 Nov 2023, 4:47 p.m. | Last Modified: 23 Nov 2023, 4:47 p.m.
Panel Version: 2.12
PMIDs 36239646 & 36860166 report a total of three ATP5B (ATP5F1B) heterozygous variants in three unrelated families. The subjects described in PMID 36239646 were monozygotic twins with de novo variant NM_001686.3: c.1004 T>C, (p.Leu335Pro). They had congenital hypermetabolism and uncoupled oxidative phosphorylation. The affected members of the two families described by PMID 36860166 had early-onset isolated dystonia. The heterozygous ATP5B (ATP5F1B) variants (NM_001686.4: c.1000A>C; p.Thr334Pro & c.1445T>C; p.Val482Ala) were inherited, with a total of four affected individuals and three unaffected carriers (PMID 36860166 figure 1), thereby, it was stated that the condition had incomplete penetrance in these cases.Created: 7 Nov 2023, 5:37 p.m. | Last Modified: 7 Nov 2023, 5:37 p.m.
Panel Version: 2.12
Carl Fratter (Oxford University Hospitals NHS Trust)
Updated information and Amber review collated by Carl Fratter May 2019 on behalf of GMS mitochondrial specialist test group: no reports of human disease; complex V subunitCreated: 10 May 2019, 12:10 p.m.
Mode of inheritance
Unknown
Phenotypes
No OMIM phenotype
Publications
- none found
Ivone Leong (Genomics England Curator)
ATP5B has a new gene name: ATP5F1BCreated: 4 Feb 2019, 11:45 a.m.
Initial gene list and info collated by Carl Fratter (Oxford University Hospitals NHS Trust) January 2019 on behalf of the GMS Mitochondrial specialist test group. Gene Symbol submitted: ATP5F1B; Suggested intial gene rating: Green.Created: 4 Feb 2019, 10:48 a.m.
Mode of inheritance
Unknown
Phenotypes
No OMIM phenotype
Louise Daugherty (Genomics England Curator)
Added new-gene-name tag, new approved HGNC gene symbol is ATP5F1BCreated: 21 Mar 2018, 12:43 p.m.
Ellen McDonagh (Genomics England Curator)
Comment when marking as ready: This gene should remain Amber due to the overall review and evidence assessment from the GMS mitochondrial specialist test group, submitted by Carl Fratter.Created: 10 May 2019, 12:32 p.m.
Comment on list classification: This gene has been demoted to Amber until further evidence is provided. This gene is currently Red on the Mitochondrial disorders panel (code 112, Version 1.132) - further evidence needs to be submitted to support promoting this gene family member to Green.Created: 29 Mar 2019, 1:12 p.m.
Comment on list classification: Candidate gene therefore should remain on the red list.Created: 26 Feb 2016, 12:42 p.m.
Shamima Rahman (UCL Institute of Child Health)
no mutation reports in literature;
good candidate gene for mitochondrial complex V (ATP synthase) deficiencyCreated: 3 Feb 2016, 6:02 p.m.
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- NHS GMS
- Phenotypes
-
- ?Hypermetabolism due to uncoupled mitochondrial oxidative phosphorylation 2, OMIM: 620085
- Tags
- OMIM
- 102910
- Clinvar variants
- Variants in ATP5B
- Penetrance
- Incomplete
- Publications
- Panels with this gene
History Filter Activity
Set penetrance
Sarah Leigh (Genomics England Curator)Penetrance for gene ATP5B was set from to None
Set mode of inheritance
Sarah Leigh (Genomics England Curator)Mode of inheritance for gene: ATP5B was changed from Unknown to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Set Phenotypes
Sarah Leigh (Genomics England Curator)Phenotypes for gene: ATP5B were changed from No OMIM phenotype to ?Hypermetabolism due to uncoupled mitochondrial oxidative phosphorylation 2, OMIM: 620085
Set publications
Sarah Leigh (Genomics England Curator)Publications for gene: ATP5B were set to
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: atp5b has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)Gene: atp5b has been classified as Amber List (Moderate Evidence).
Added Tag
Ivone Leong (Genomics England Curator)Tag new-gene-name tag was added to gene: ATP5B.
Created, Added New Source, Set mode of inheritance, Set Phenotypes
Ivone Leong (Genomics England Curator)gene: ATP5B was added gene: ATP5B was added to Mitochondrial disorder with complex V deficiency. Sources: Expert Review Green,NHS GMS Mode of inheritance for gene: ATP5B was set to Unknown Phenotypes for gene: ATP5B were set to No OMIM phenotype