Cholestasis
Gene: GNASEnsemblGeneIds (GRCh38): ENSG00000087460
EnsemblGeneIds (GRCh37): ENSG00000087460
OMIM: 139320, Gene2Phenotype
GNAS is in 19 panels
3 reviews
Ivone Leong (Genomics England Curator)
Comment on list classification: As discussed in the GMS Gastrohepatology Specialist Test Group webex call 14th Jan 2019: The Specialist Test Group agreed that there is not enough evidence for this gene to be rated green. Therefore, demoted from green to amber.Created: 31 Jan 2019, 9:57 a.m.
Initial gene list and info collated by Miranda Durkie Sheffield Diagnostic Genetics Service December 2018 on behalf of the GMS Gastrohepatology specialist test group. Gene Symbol submitted: GNAS; Suggested intial gene rating: Green; Evidence for inclusion: none given; Evidence for exclusion: none given; Technical notes (e.g. non-coding/CNV mutations requiring coverage?): none givenCreated: 7 Jan 2019, 4:42 p.m.
Anna de Burca (Oxford University Hospitals NHS Foundation Trust)
Comment on mode of inheritance: See mode of pathogenicity: caused by somatic mosaicism for activating pathogenic variantsCreated: 30 Jul 2018, 6:24 a.m.
Comment on publications: Case report of two unrelated infants presenting with cholestasis and later diagnosed with McCune-Albright syndrome. Cholangiography was normal. Although cholestasis was reported in the original cases described by McCune and Albright, this is not a commonly reported finding in McCune-Albright syndrome, and this publication does not provide sufficient evidence of a causal link.Created: 27 Jul 2018, 6:08 a.m.
Comment on mode of inheritance: Somatic mosaicism for activating pathogenic variantCreated: 27 Jul 2018, 6:03 a.m.
Louise Daugherty (Genomics England Curator)
Gene added from King's College Hospital NHS Foundation Trust diagnostic cholestasis gene panel. This gene has been rated as AMBER and needs further curational review to assess pertinence prior to v1.Created: 25 Jul 2018, 4:20 p.m.
Mode of inheritance
Unknown
Phenotypes
McCune-Albright syndrome; Cholestasis
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- Other
- NHS GMS
- Expert list
- Phenotypes
-
- McCune-Albright syndrome
- Cholestasis
- OMIM
- 139320
- Clinvar variants
- Variants in GNAS
- Penetrance
- None
- Publications
- Mode of Pathogenicity
- Other - please provide details in the comments
- Panels with this gene
-
- VACTERL-like phenotypes
- Cholestasis
- Cytopenias and congenital anaemias
- Albright hereditary osteodystrophy, pseudohypoparathyroidism, pseudopseudohypoparathyroidism, acrodysostosis and osteoma cutis
- Limb disorders
- DDG2P
- Renal tubulopathies
- Intellectual disability
- Pigmentary skin disorders
- Osteogenesis imperfecta
- Neurofibromatosis Type 1
- Severe early-onset obesity
- Mosaic skin disorders - deep sequencing
- Inherited non-medullary thyroid cancer
- Neonatal cholestasis
- Fetal anomalies
- Congenital hypothyroidism
- Skeletal dysplasia
- Rare syndromic craniosynostosis or isolated multisuture synostosis
History Filter Activity
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: gnas has been classified as Amber List (Moderate Evidence).
Entity classified by Genomics England curator
Ivone Leong (Genomics England Curator)Gene: gnas has been classified as Amber List (Moderate Evidence).
Added New Source, Set mode of inheritance, Set mode of pathogenicity, Set Phenotypes, Set publications
Ivone Leong (Genomics England Curator)Source Other was added to GNAS. Mode of inheritance for gene GNAS was changed from to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted Mode of pathogenicity for gene GNAS was changed from to Other - please provide details in the comments Added phenotypes Cholestasis; McCune-Albright syndrome for gene: GNAS Publications for gene GNAS were changed from to 10673080
Added New Source, Status Update
Ivone Leong (Genomics England Curator)Source Expert Review Green was added to GNAS. Rating Changed from Red List (low evidence) to Green List (high evidence)
Created, Added New Source, Set mode of inheritance
Ivone Leong (Genomics England Curator)gene: GNAS was added gene: GNAS was added to Cholestasis. Sources: NHS GMS Mode of inheritance for gene: GNAS was set to