Respiratory ciliopathies including non-CF bronchiectasis
Gene: PIK3R1EnsemblGeneIds (GRCh38): ENSG00000145675
EnsemblGeneIds (GRCh37): ENSG00000145675
OMIM: 171833, Gene2Phenotype
PIK3R1 is in 19 panels
2 reviews
Louise Daugherty (Genomics England Curator)
From GMS Respiratory Specialist Test Group webex call 18th Jan 2019: agreed there is enough evidence to rate this gene Green. Ian Berry to check with Sinisa Savic and Daniel Peckham re. phenotypeCreated: 21 Jan 2019, 5:30 p.m.
Comment on list classification: New gene added by external reviewer. To be reviewed in GMS Respiratory specialist test group 18th Jan 2018. Confirm phenotype, MOI and rating.Created: 17 Jan 2019, 11:02 a.m.
Comment on phenotypes: Added phenotypes from OMIM that indicate relevance to inclusion on the Respiratory ciliopathies including non-CF bronchiectasis panelCreated: 17 Jan 2019, 11:02 a.m.
Comment on publications: Added publication suggested by external reviewer to support support gene-disease associationCreated: 17 Jan 2019, 11:01 a.m.
Ian Berry (Leeds Genetics Laboratory)
Expert review by Dr Sinisa Savic (Clinical Immunologist) and Dr Daniel Peckham (Respiratory Physician), bronchiectasis expert team from Leeds. Causes a form of primary immunodeficiency which frequently results in bronchiectasis with limited additional immunological findings.
Sources: Expert ReviewCreated: 11 Jan 2019, 4:38 p.m.
Mode of inheritance
BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
Publications
- PMID: 29556229
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- NHS GMS
- Phenotypes
-
- Immunodeficiency 36, 616005
- Bronchiectasis
- OMIM
- 171833
- Clinvar variants
- Variants in PIK3R1
- Penetrance
- unknown
- Publications
- Panels with this gene
-
- Primary immunodeficiency or monogenic inflammatory bowel disease
- DDG2P
- Insulin resistance (including lipodystrophy)
- Corneal abnormalities
- Monogenic short stature
- COVID-19 research
- Familial diabetes
- Segmental overgrowth disorders - Deep sequencing
- Respiratory ciliopathies including non-CF bronchiectasis
- Monogenic diabetes
- Lipodystrophy - childhood onset
- IUGR and IGF abnormalities
- Mosaic skin disorders - deep sequencing
- Skeletal dysplasia
- Fetal anomalies
- Gastrointestinal epithelial barrier disorders
- Infantile enterocolitis & monogenic inflammatory bowel disease
- Diabetes with additional phenotypes suggestive of a monogenic aetiology
- Intellectual disability
History Filter Activity
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: pik3r1 has been classified as Green List (High Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: PIK3R1 were changed from to Immunodeficiency 36, 616005; Bronchiectasis
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: PIK3R1 were set to 29556229
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: PIK3R1 were set to PMID: 29556229
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to PIK3R1. Rating Changed from No List (delete) to Red List (low evidence)
Created, Added New Source, Set mode of inheritance, Set publications, Set penetrance
Ian Berry (Leeds Genetics Laboratory)gene: PIK3R1 was added gene: PIK3R1 was added to Respiratory ciliopathies including non-CF bronchiectasis. Sources: Expert Review Mode of inheritance for gene: PIK3R1 was set to BOTH monoallelic and biallelic (but BIALLELIC mutations cause a more SEVERE disease form), autosomal or pseudoautosomal Publications for gene: PIK3R1 were set to PMID: 29556229 Penetrance for gene: PIK3R1 were set to unknown Review for gene: PIK3R1 was set to GREEN gene: PIK3R1 was marked as current diagnostic