Childhood onset hereditary spastic paraplegia

Gene: AMFR

Green List (high evidence)

AMFR (autocrine motility factor receptor)
EnsemblGeneIds (GRCh38): ENSG00000159461
EnsemblGeneIds (GRCh37): ENSG00000159461
OMIM: 603243, Gene2Phenotype
AMFR is in 3 panels

1 review

Achchuthan Shanmugasundram (Genomics England Curator)

Green List (high evidence)

The rating of this gene has been updated to green and the mode of inheritance set to 'BIALLELIC, autosomal or pseudoautosomal' following NHS Genomic Medicine Service approval.
Created: 4 May 2024, 6:25 p.m. | Last Modified: 4 May 2024, 6:26 p.m.
Panel Version: 5.3
Comment on list classification: There is sufficient evidence for this gene to be promoted to green rating at the next GMS review.
Created: 28 Jul 2023, 10:23 a.m. | Last Modified: 28 Jul 2023, 10:23 a.m.
Panel Version: 4.13
PMID:37119330 - 20 individuals from 8 unrelated consanguineous families of various origins were identified with autosomal recessive variants in AMFR gene. All patients had early disease onset (<3 years), including motor delay, lower limb hyperreflexia and spastic paraplegia that match the typical phenotypes of hereditary spastic paraplegia.

This gene has been associated with relevant phenotypes in OMIM (MIM #620379), but not in Gene2Phenotype.
Sources: Literature
Created: 28 Jul 2023, 10:22 a.m. | Last Modified: 28 Jul 2023, 10:24 a.m.
Panel Version: 4.13

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Spastic paraplegia 89, autosomal recessive, OMIM:620379

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Literature
Phenotypes
  • Spastic paraplegia 89, autosomal recessive, OMIM:620379
OMIM
603243
Clinvar variants
Variants in AMFR
Penetrance
None
Publications
Panels with this gene

History Filter Activity

4 May 2024, Gel status: 3

Removed Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q3_23_promote_green was removed from gene: AMFR.

4 May 2024, Gel status: 3

Added New Source, Added New Source, Status Update

Achchuthan Shanmugasundram (Genomics England Curator)

Source NHS GMS was added to AMFR. Source Expert Review Green was added to AMFR. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)

28 Jul 2023, Gel status: 2

Entity classified by Genomics England curator

Achchuthan Shanmugasundram (Genomics England Curator)

Gene: amfr has been classified as Amber List (Moderate Evidence).

28 Jul 2023, Gel status: 1

Added Tag

Achchuthan Shanmugasundram (Genomics England Curator)

Tag Q3_23_promote_green tag was added to gene: AMFR.

28 Jul 2023, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes

Achchuthan Shanmugasundram (Genomics England Curator)

gene: AMFR was added gene: AMFR was added to Childhood onset hereditary spastic paraplegia. Sources: Literature Mode of inheritance for gene: AMFR was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: AMFR were set to 37119330 Phenotypes for gene: AMFR were set to Spastic paraplegia 89, autosomal recessive, OMIM:620379 Review for gene: AMFR was set to GREEN