Childhood onset hereditary spastic paraplegia
Gene: CPT1CEnsemblGeneIds (GRCh38): ENSG00000169169
EnsemblGeneIds (GRCh37): ENSG00000169169
OMIM: 608846, Gene2Phenotype
CPT1C is in 2 panels
5 reviews
Arina Puzriakova (Genomics England Curator)
Comment on list classification: Overall one family with confirmed adult-onset and one with childhood-onset have been reported, as well as two further unrelated cases but unfortunately without indication of age of onset. Although onset is variable, the gene-disease relationship is supported by a strong animal model, and therefore it is worth including CPT1C on both HSP panels as Green.Created: 22 Nov 2021, 4:36 p.m. | Last Modified: 22 Nov 2021, 4:36 p.m.
Panel Version: 2.104
Another family reported by Hong et al., 2019 (PMID: 30911584) including a sib pair with childhood-onset pure HSP. Both harboured a novel nonsense variant in the CPT1C gene which was also identified in the seemingly unaffected mother (except for hyperreflexia and a positive Babinski sign).Created: 22 Nov 2021, 4:24 p.m. | Last Modified: 22 Nov 2021, 4:24 p.m.
Panel Version: 2.102
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Publications
Zornitza Stark (Australian Genomics)
And another family reported in PMID 25751282. However, note onset is in adulthood, and this gene is rated Amber on the adult HSP panel: suggest rating Green there.Created: 18 Sep 2020, 7:30 a.m. | Last Modified: 18 Sep 2020, 7:30 a.m.
Panel Version: 2.15
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Spastic paraplegia 73, autosomal dominant, 616282
Publications
Nick Beauchamp (Sheffield Diagnostic Genetics Service)
Adult onset. Mouse model. functional study. Single family. Two further patients in exome study (PMID: 30564185).Created: 10 May 2019, 11:28 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Publications
Variants in this GENE are reported as part of current diagnostic practice
Louise Daugherty (Genomics England Curator)
Rating and review submitted on behalf of James Polke (Neurogenetics Laboratory,Institute of Neurology, London), on behalf of London North GLH for GMS Neurology specialist test group.Created: 9 May 2019, 4:54 p.m.
James Polke (Neurogenetics Laboratory, Institute of Neurology, London)
only one family reported but great animal model replicates the phenotype. affected members of a large 3-generation Italian family with autosomal dominant spastic paraplegia-73. In sheffield HSP panelCreated: 28 Apr 2019, 4:16 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
?Spastic paraplegia 73, autosomal dominant, 616282, AD
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Green
- Yorkshire and North East GLH
- NHS GMS
- London North GLH
- Phenotypes
-
- Spastic paraplegia 73, autosomal dominant, OMIM:616282
- OMIM
- 608846
- Clinvar variants
- Variants in CPT1C
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Arina Puzriakova (Genomics England Curator)Gene: cpt1c has been classified as Green List (High Evidence).
Set publications
Arina Puzriakova (Genomics England Curator)Publications for gene: CPT1C were set to 25751282; 30564185
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: CPT1C were changed from ?Spastic paraplegia 73, autosomal dominant, 616282, AD to Spastic paraplegia 73, autosomal dominant, OMIM:616282
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: CPT1C was changed from BIALLELIC, autosomal or pseudoautosomal to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Set publications
Louise Daugherty (Genomics England Curator)Publications for gene: CPT1C were set to
Added New Source, Status Update
Louise Daugherty (Genomics England Curator)Source Yorkshire and North East GLH was added to CPT1C. Rating Changed from Green List (high evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Louise Daugherty (Genomics England Curator)Gene: cpt1c has been classified as Green List (High Evidence).
Set Phenotypes
Louise Daugherty (Genomics England Curator)Phenotypes for gene: CPT1C were changed from to ?Spastic paraplegia 73, autosomal dominant, 616282, AD
Set mode of inheritance
Louise Daugherty (Genomics England Curator)Mode of inheritance for gene: CPT1C was changed from to BIALLELIC, autosomal or pseudoautosomal
Added New Source
Louise Daugherty (Genomics England Curator)Source NHS GMS was added to CPT1C.
Created, Added New Source, Set mode of inheritance
Louise Daugherty (Genomics England Curator)gene: CPT1C was added gene: CPT1C was added to Hereditary spastic paraplegia - childhood onset. Sources: London North GLH Mode of inheritance for gene: CPT1C was set to