Haematuria
Gene: CFHR5EnsemblGeneIds (GRCh38): ENSG00000134389
EnsemblGeneIds (GRCh37): ENSG00000134389
OMIM: 608593, Gene2Phenotype
CFHR5 is in 6 panels
3 reviews
Eleanor Williams (Genomics England Curator)
Comment on list classification: Promoting to Amber after discussion with NHS GMS renal specialist group on 2019-02-04. Newcastle group report that they had 1 family with a variant in this gene.Created: 12 Feb 2019, 10:46 p.m.
This gene was part of an initial gene list collated by Elizabeth Watson, North Bristol NHS Trust, February 2019 on behalf of the GMS Renal Specialist Test Group. Gene Symbol submitted: CFHR5; Suggested initial gene rating: Green; Evidence for inclusion: PMID:23402027, **Cannot access full text of PMID: 23402027 but states 21 families in abstract; Evidence for exclusion: none provided; Technical notes (e.g. non-coding/CNV mutations requiring coverage?): none provided;Created: 3 Feb 2019, 3:19 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Nephropathy due to CFHR5 deficiency #614809
Publications
- PMID:23402027
Ellen Thomas (Genomics England Curator)
Comment when marking as ready: Await discussions by V and F working group then consider promoting to green.Created: 29 Jan 2016, 1:32 p.m.
Comment on list classification: This has a single variant which has been reported in multiple families but this is due to a founder effect. Plan is to leave it on the red list until the V and F working group has decided on an approach to this situation, to ensure the approach is even across all phenotypes.Created: 29 Jan 2016, 1:28 p.m.
Daniel Gale (UCL)
Variants resulting in duplication of protein domains or hybrid genes are pathogenic and probably have a gain-of-function mechanism. Evidence for pathogenic role of SNVs is less strong.Created: 7 Oct 2015, 1:01 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Mode of pathogenicity
Other
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- NHS GMS
- Phenotypes
-
- Nephropathy due to CFHR5 deficiency OMIM:614809
- OMIM
- 608593
- Clinvar variants
- Variants in CFHR5
- Penetrance
- Complete
- Publications
- Mode of Pathogenicity
- Other - please provide details in the comments
- Panels with this gene
History Filter Activity
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: CFHR5 were changed from Haematuria; C3 glomerulopathy; kidney failure; macroscopic haematuria; Nephropathy due to CFHR5 deficiency #614809 to Nephropathy due to CFHR5 deficiency OMIM:614809
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: CFHR5 were changed from Haematuria; C3 glomerulopathy; kidney failure; macroscopic haematuria to Haematuria; C3 glomerulopathy; kidney failure; macroscopic haematuria; Nephropathy due to CFHR5 deficiency #614809
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: CFHR5 were set to PubMed: 20800271; 24067434
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: cfhr5 has been classified as Amber List (Moderate Evidence).
Added New Source
Eleanor Williams (Genomics England Curator)Source NHS GMS was added to CFHR5.
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Mode of Inheritance
Daniel Gale (UCL)Model of inheritance for gene CFHR5 was set to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Added New Source
Daniel Gale (UCL)CFHR5 was added to Familial haematuriapanel. Source: Expert Review
Added New Source
Daniel Gale (UCL)CFHR5 was added to Familial haematuriapanel. Sources: Literature,Expert Review