Description
This panel is used for clinical indication 'R101 Ehlers Danlos syndrome with a likely monogenic cause' in the NHS Genomic Medicine Service.

Further information on the testing criteria and any overlapping clinical indications can be found within (https://www.england.nhs.uk/publication/national-genomic-test-directories/) under 'R101 Ehlers Danlos syndrome with a likely monogenic cause'.

A version of this panel has been signed off under NHS Genomic Medicine Service governance (see 'Latest signed off version' in the panel header information).

This panel will continue to be curated based on external reviews and Genomics England curation. New changes will be reflected in an increase to the minor version of the panel and details of these can be viewed in the 'Panel Activity' page. Periodically, these changes will be reviewed by a NHS Genomic Medicine Service evaluation process. The content that is agreed for the GMS panels will be reflected in an updated signed off version number.

CNVs, STRs and genes encoded by the mitochondrial genome may not be routinely included in the analysis where the panel is NOT delivered by WGS. Please contact your Genomic Laboratory Hub for information regarding specific queries.

Some of the genes in this panel cause conditions that typically present in adulthood. Please consider this when applying the panel.

This panel was originally developed for the 100,000 Genomes Project and is still being used for participants in the project. For the rare disease eligibility criteria refer to: https://www.genomicsengland.co.uk/rarediseasecriteria100K

This panel is designed for analysis of families with a working or clinical diagnosis of any of the Ehlers-Danlos syndromes subtypes set out in 'The 2017 international classification of the Ehlers–Danlos syndromes' Malfait et al., 2017 (PMID: 28306229). 

In addition, this panel has been designed to capture the main differential diagnoses for these syndromes, including connective tissue phenotypes associated with vascular disease. Where participants have a vascular phenotype, as defined by the submitted HPO terms, they will be offered the Familial Thoracic Aortic Aneurysm Disease panel in addition, to capture aetiologies associated with an isolated vascular phenotype.

Clinical EDS subtypes included:
•	Classical EDS
•	Classical-like EDS
•	Cardiac-valvular EDS
•	Vascular EDS
•	Hypermobile EDS
•	Arthrochalasia EDS
•	Dermatosparaxis EDS
•	Kyphoscoliotic EDS
•	Brittle Cornea syndrome
•	Spondylodysplastic EDS
•	Musculocontractural EDS
•	Myopathic EDS
•	Periodontal EDS

This panel was reviewed by several members of The Ehlers Danlos Society, to find out more about the society see : https://ehlers-danlos.com

19 reviewers

  • Ellen McDonagh (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Rebecca Pollitt (Sheffield Diagnostic Genetics Service ; University of Sheffield)

    Group: GeCIP domain
    Workplace: NHS diagnostic lab

  • Raymond Dalgleish (University of Leicester)

    Group: GeCIP domain
    Workplace: Research lab

  • Ellen Thomas (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Sarah Leigh (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Neeti Ghali (NWTRGS, Northwick Park Hospital)

    Group: NHS Genomic Medicine Centre
    Workplace: NHS clinical service

  • Rebecca Foulger (Genomics England curator)

    Group: Other
    Workplace: Other

  • Louise Daugherty (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Helen Brittain (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Angela Brady (Nhs)

    Group: GeCIP domain
    Workplace: NHS clinical service

  • Eleanor Williams (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Zornitza Stark (Australian Genomics)

    Group: Other
    Workplace: Other clinical service

  • Anna de Burca (Genomics England Curator)

    Group: NHS Genomic Medicine Centre
    Workplace: NHS clinical service

  • Ivone Leong (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Duncan Baker (Sheffield Genetics)

    Group: NHS Genomic Medicine Centre
    Workplace: NHS diagnostic lab

  • Arina Puzriakova (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Andžela Lazdāne (Children's Clinical University Hospital of Latvia)

    Group: Other
    Workplace: Other diagnostic lab

  • Mafalda Gomes (Genomics England Curator)

    Group: Other
    Workplace: Other

  • Achchuthan Shanmugasundram (Genomics England Curator)

    Group: Other
    Workplace: Other

80 Entities

80 reviewed, 47 green

List Entity Reviews Mode of inheritance Details
80 Entitiess
Green Green List (high evidence)
ADAMTS2
6 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, dermatosparaxis type, OMIM:225410
Tags
Green Green List (high evidence)
AEBP1
5 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Ehlers-Danlos syndrome, classic-like, 2, OMIM:618000
Tags
Green Green List (high evidence)
ALDH18A1
5 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Cutis laxa, autosomal recessive, type IIIA, OMIM:219150
  • Cutis laxa, autosomal dominant 3, OMIM:616603
Tags
Green Green List (high evidence)
ATP6V0A2
6 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Cutis laxa, autosomal recessive, type IIA, OMIM:219200
  • Wrinkly skin syndrome, OMIM:278250
Tags
Green Green List (high evidence)
ATP6V1A
6 reviews
5 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Cutis laxa, autosomal recessive, type IID, OMIM:617403
Tags
Green Green List (high evidence)
ATP7A
6 reviews
4 green
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Occipital horn syndrome, OMIM:304150
Tags
Green Green List (high evidence)
B3GALT6
7 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, spondylodysplastic type, 2, OMIM:615349
  • Spondyloepimetaphyseal dysplasia with joint laxity, type 1, with or without fractures, OMIM:271640
Tags
Green Green List (high evidence)
B4GALT7
7 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, spondylodysplastic type, 1, OMIM:130070
Tags
Green Green List (high evidence)
BGN
5 reviews
3 green
X-LINKED: hemizygous mutation in males, monoallelic mutations in females may cause disease (may be less severe, later onset than males)
Sources
  • Expert Review Green
  • NHS GMS
  • Other
Phenotypes
  • Meester-Loeys syndrome, OMIM:300989
Tags
Green Green List (high evidence)
C1R
6 reviews
4 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Ehlers-Danlos syndrome, periodontal type, 1, OMIM:130080
Tags
Green Green List (high evidence)
C1S
6 reviews
4 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Ehlers-Danlos syndrome, periodontal type, 2, OMIM:617174
Tags
Green Green List (high evidence)
CBS
6 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • UKGTN
Phenotypes
  • Homocystinuria, B6-responsive and nonresponsive types, OMIM:236200
Tags
  • treatable
Green Green List (high evidence)
CHST14
9 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review
  • Expert Review Green
  • Literature
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, musculocontractural type 1, OMIM:601776
Tags
Green Green List (high evidence)
COL12A1
7 reviews
4 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Bethlem myopathy 2, OMIM:616471
  • Bethlem myopathy 2, MONDO:0034022
Tags
Green Green List (high evidence)
COL1A1
6 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, arthrochalasia type, 1, OMIM:130060
  • Combined osteogenesis imperfecta and Ehlers-Danlos syndrome 1, OMIM:619115
Tags
Green Green List (high evidence)
COL1A2
6 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Combined osteogenesis imperfecta and Ehlers-Danlos syndrome 2, OMIM:619120
  • Ehlers-Danlos syndrome, arthrochalasia type, 2, OMIM:617821
  • Ehlers-Danlos syndrome, cardiac valvular type, OMIM:225320
Tags
Green Green List (high evidence)
COL3A1
7 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Ehlers-Danlos syndrome, vascular type, OMIM:130050
Tags
Green Green List (high evidence)
COL5A1
6 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Ehlers-Danlos syndrome, classic type, 1, OMIM:130000
Tags
Green Green List (high evidence)
COL5A2
6 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Ehlers-Danlos syndrome, classic type, 2, OMIM:130010
Tags
Green Green List (high evidence)
COL6A1
5 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Bethlem myopathy 1, OMIM:158810
  • Ullrich congenital muscular dystrophy 1, OMIM:254090
Tags
Green Green List (high evidence)
COL6A2
5 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Bethlem myopathy 1,OMIM:158810
  • Ullrich congenital muscular dystrophy 1, OMIM:254090
Tags
Green Green List (high evidence)
COL6A3
5 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Bethlem myopathy 1, OMIM:158810
  • Ullrich congenital muscular dystrophy 1, OMIM:254090
Tags
Green Green List (high evidence)
DSE
6 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Ehlers-Danlos syndrome, musculocontractural type 2, OMIM:615539
Tags
  • missense
Green Green List (high evidence)
EFEMP2
6 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Cutis laxa, autosomal recessive, type IB, OMIM:614437
Tags
Green Green List (high evidence)
ELN
6 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Cutis laxa, autosomal dominant, OMIM:123700
Tags
Green Green List (high evidence)
FBLN5
6 reviews
3 green
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • ?Cutis laxa, autosomal dominant 2, OMIM:614434
  • Cutis laxa, autosomal recessive, type IA, OMIM:219100
Tags
Green Green List (high evidence)
FBN1
6 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Marfan syndrome, OMIM:154700
Tags
Green Green List (high evidence)
FBN2
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Contractural arachnodactyly, congenital, OMIM:121050
Tags
Green Green List (high evidence)
FKBP14
9 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Other
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, kyphoscoliotic type, 2, OMIM:614557
Tags
Green Green List (high evidence)
GORAB
6 reviews
3 green 2 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Other
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Geroderma osteodysplasticum, OMIM:231070
Tags
Green Green List (high evidence)
LOX
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review
  • Expert Review Green
  • NHS GMS
  • Other
Phenotypes
  • Aortic aneurysm, familial thoracic 10, OMIM:617168
Tags
Green Green List (high evidence)
LTBP4
6 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Cutis laxa, autosomal recessive, type IC, OMIM:613177
Tags
Green Green List (high evidence)
PLOD1
8 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Eligibility statement prior genetic testing
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Other
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Ehlers-Danlos syndrome, kyphoscoliotic type, 1, OMIM:225400
Tags
Green Green List (high evidence)
PRDM5
6 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Brittle cornea syndrome 2, OMIM:614170
Tags
Green Green List (high evidence)
PYCR1
5 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Cutis laxa, autosomal recessive, type IIIB, OMIM:614438
  • Cutis laxa, autosomal recessive, type IIB, OMIM:612940
Tags
Green Green List (high evidence)
RIN2
6 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Macrocephaly, alopecia, cutis laxa, and scoliosis, OMIM:613075
Tags
Green Green List (high evidence)
ROBO3
4 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Gaze palsy, familial horizontal, with progressive scoliosis, 1, OMIM:607313
Tags
Green Green List (high evidence)
SKI
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Shprintzen-Goldberg syndrome, OMIM:182212
Tags
Green Green List (high evidence)
SLC39A13
7 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, spondylodysplastic type, 3, OMIM:612350
Tags
Green Green List (high evidence)
SMAD2
5 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Green
  • Literature
  • NHS GMS
Phenotypes
  • Loeys-Dietz syndrome, MONDO:0018954
Tags
Green Green List (high evidence)
SMAD3
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
Phenotypes
  • Loeys-Dietz syndrome 3, OMIM:613795
Tags
Green Green List (high evidence)
TGFB2
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • NHS GMS
Phenotypes
  • Loeys-Dietz syndrome 4, OMIM:614816
Tags
Green Green List (high evidence)
TGFB3
5 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Green
  • NHS GMS
  • Other
Phenotypes
  • Loeys-Dietz syndrome 5, OMIM:615582
Tags
Green Green List (high evidence)
TGFBR1
6 reviews
3 green
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
Phenotypes
  • Loeys-Dietz syndrome 1, OMIM:609192
Tags
Green Green List (high evidence)
TGFBR2
7 reviews
4 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
Phenotypes
  • Loeys-Dietz syndrome 2, OMIM:610168
Tags
Green Green List (high evidence)
TNXB
7 reviews
4 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Green
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Ehlers-Danlos syndrome, classic-like, 1, OMIM:606408
Tags
Green Green List (high evidence)
ZNF469
6 reviews
3 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Green
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Brittle cornea syndrome 1, OMIM:229200
Tags
Amber Amber List (moderate evidence)
ABL1
2 reviews
1 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Congenital heart defects and skeletal malformations syndrome, OMIM:617602
Tags
  • missense
Amber Amber List (moderate evidence)
ACTA2
5 reviews
2 green
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
Phenotypes
  • Aortic aneurysm, familial thoracic 6, OMIM:611788
Tags
Amber Amber List (moderate evidence)
ADAMTSL2
2 reviews
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Dermatosparaxic Ehlers Danlos syndrome
Tags
Amber Amber List (moderate evidence)
DCC
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Gaze palsy, familial horizontal, with progressive scoliosis, 2, OMIM:617542
Tags
  • structural-variant
  • watchlist
Amber Amber List (moderate evidence)
EFEMP1
2 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Connective tissue disorder
Tags
  • Q1_24_promote_green
Amber Amber List (moderate evidence)
IPO8
4 reviews
1 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Loeys-Dietz syndrome-like
  • cardiovascular, neurologic, skeletal and immunologic abnormalities
Tags
Amber Amber List (moderate evidence)
LTBP1
3 reviews
2 green
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Cutis laxa, autosomal recessive, type IIE, OMIM:619451
  • Joint hyperlaxity
Tags
Amber Amber List (moderate evidence)
LTBP2
2 reviews
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Amber
  • Literature
Phenotypes
  • Microspherophakia and/or megalocornea, with ectopia lentis and with or without secondary glaucoma, OMIM:251750
  • Glaucoma 3, primary congenital, D, OMIM:613086
  • Weill-Marchesani syndrome 3, recessive, OMIM:614819
Tags
  • Q4_23_promote_green
Amber Amber List (moderate evidence)
MYLK
7 reviews
3 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Aortic aneurysm, familial thoracic 7, OMIM:613780
Tags
Amber Amber List (moderate evidence)
NOTCH1
7 reviews
2 green 2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • connective tissue disease, MONDO:0003900
Tags
Amber Amber List (moderate evidence)
PIEZO2
1 review
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
  • Expert Review Amber
Phenotypes
  • ?Marden-Walker syndrome, OMIM:248700
  • connective tissue disease, MONDO:0003900
Tags
Red Red List (low evidence)
ACVR1
2 reviews
2 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert list
Phenotypes
  • Connective Tissue Disorders
Tags
Red Red List (low evidence)
COX7B
2 reviews
2 red
Not set
Sources
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Aplasia cutis congenita, reticulolinear, with mmicrocephaly, facial dysmorphism and other congenital anomalies, 300887
Tags
Red Red List (low evidence)
FLCN
3 reviews
2 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert Review Red
Phenotypes
  • Pneumothorax, primary spontaneous, 173600
  • Connective Tissue Disorders
Tags
Red Red List (low evidence)
FLNA
4 reviews
2 green 2 red
Not set
Sources
  • Emory Genetics Laboratory
  • Expert list
Phenotypes
  • Cardiac valvular dysplasia, X-linked, OMIM:314400
  • Heterotopia, periventricular, 1, OMIM:300049
Tags
Red Red List (low evidence)
MYH11
4 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Emory Genetics Laboratory
  • Expert list
Phenotypes
  • Aortic aneurysm, familial thoracic 4, 132900
Tags
Red Red List (low evidence)
PLOD3
3 reviews
3 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review
Phenotypes
  • Lysyl hydroxylase 3 deficiency, 612394
Tags
Red Red List (low evidence)
SLC2A10
4 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
Phenotypes
  • Arterial tortuosity syndrome, 208050
  • Connective Tissue Disorders, Cutis laxa
Tags
Red Red List (low evidence)
TPSAB1
1 review
1 red
Unknown
Sources
  • Expert Review
  • Literature
Phenotypes
  • ?Mast cell dysfunction (with joint hypermobility)
Tags
  • gene-checked
No list No list
ABCC6
3 reviews
1 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Removed
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Pseudoxanthoma elasticum, AR
  • 264800
  • Pseudoxanthoma elasticum, forme fruste, AD
  • 177850
Tags
  • curated_removed
No list No list
COL11A1
5 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Removed
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Stickler syndrome, type II, 604841
  • Connective Tissue Disorders
  • Marshall syndrome, 154780
  • Fibrochondrogenesis, 228520
Tags
  • curated_removed
No list No list
COL11A2
5 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Removed
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Stickler syndrome, type III, (AD),184840
  • Otospondylomegaepiphyseal dysplasia,(AR) 215150
  • Weissenbacher-Zweymuller syndrome, (AD), 277610
  • Fibrochondrogenesis 2, (AR,AD), 614524
  • Connective Tissue Disorders
  • autosomal dominant otospondylomegaepiphyseal dysplasia OMIM 184840
  • autosomal recessive otospondylomegaepiphyseal dysplasia OMIM 215150
Tags
  • curated_removed
No list No list
COL2A1
5 reviews
2 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Removed
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
  • UKGTN
Phenotypes
  • Stickler syndrome, type I, 108300
  • Connective Tissue Disorders
  • Kniest dysplasia, 156550
  • Achondrogenesis, type II or hypochondrogenesis, 200610
  • SED congenita, 183900
  • SMED Strudwick type, 184250
  • Epiphyseal dysplasia, multiple, with myopia and deafness, 132450
Tags
  • curated_removed
No list No list
COL9A1
5 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Removed
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Stickler syndrome, type IV, 614134
  • ?Epiphyseal dysplasia, multiple, 6, 614135
  • Connective Tissue Disorders
  • ocular, auditory, skeletal, and orofacial abnormalities.Most forms of Stickler syndrome are characterized by the eye findings of high myopia, vitreoretinal degeneration, retinal detachment, and cataracts.
Tags
  • curated_removed
No list No list
COL9A2
5 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Removed
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Stickler syndrome, type V, (AR), 614284
  • Epiphyseal dysplasia, multiple, 2, (AD), 600204
  • Connective Tissue Disorders
  • Sticklers high myopia, vitreoretinal degeneration, retinal detachment, and mild to moderate sensorineural hearing loss. Multiple epiphyseal dysplasia characterized by joint pain and stiffness, mild short stature, and degenerative joint disease.
Tags
  • curated_removed
No list No list
COL9A3
5 reviews
2 green 1 red
BOTH monoallelic and biallelic, autosomal or pseudoautosomal
Sources
  • Expert list
  • Expert Review Removed
  • NHS GMS
Phenotypes
  • Stickler syndrome VI
  • Connective Tissue Disorders
  • Epiphyseal dysplasia, multiple, 3, with or without myopathy, 600969
  • Multiple epiphyseal dysplasia
Tags
  • curated_removed
No list No list
GGCX
5 reviews
2 green 1 red
BIALLELIC, autosomal or pseudoautosomal
Sources
  • Expert Review Removed
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Pseudoxanthoma elasticum like disorder with multiple coagulation factor deficiency, 610842
Tags
  • curated_removed
  • pharmacogenetics
No list No list
MED12
1 review
X-LINKED: hemizygous mutation in males, biallelic mutations in females
Sources
  • Emory Genetics Laboratory
  • Expert Review Removed
Phenotypes
  • Lujan-Fryns syndrome, 309520
  • Ohdo syndrome, X-linked, 300895
  • Opitz-Kaveggia syndrome, 305450
Tags
  • curated_removed
No list No list
PKD2
1 review
Not set
Sources
  • Emory Genetics Laboratory
  • Expert list
  • Expert Review Removed
Phenotypes
  • Polycystic kidney disease 2, 613095
  • Connective Tissue Disorders
Tags
  • curated_removed
No list No list
SERPINA1
1 review
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Removed
Tags
  • curated_removed
No list No list
SMAD4
5 reviews
3 green 1 red
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Sources
  • Expert list
  • Expert Review Removed
  • Illumina TruGenome Clinical Sequencing Services
  • NHS GMS
  • Radboud University Medical Center, Nijmegen
Phenotypes
  • Juvenile polyposis/hereditary hemorrhagic telangiectasia syndrome, 175050
  • juvenile polyposis syndrome (JP) and hereditary hemorrhagic telangiectasia (HHT)
  • ~20% with connective tissue features.
Tags
  • curated_removed
No list No list
TSC1
1 review
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Removed
Tags
  • curated_removed
No list No list
TSC2
1 review
Not set
Sources
  • Emory Genetics Laboratory
  • Expert Review Removed
Phenotypes
  • cutis laxa (Conditions which present with lung cystic lesions include alpha-1-antitrypsin deficiency, Birt-Hogg-Dube syndrome, tuberous sclerosis, complex-associated lymphangioleiomyomatosis (LAM), cutis laxa, and emphysema)
Tags
  • curated_removed

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