Proteinuric renal disease
Gene: YRDCEnsemblGeneIds (GRCh38): ENSG00000196449
EnsemblGeneIds (GRCh37): ENSG00000196449
OMIM: 612276, Gene2Phenotype
YRDC is in 3 panels
2 reviews
Eleanor Williams (Genomics England Curator)
The rating of this gene has been updated following NHS Genomic Medicine Service approval.Created: 7 Mar 2022, 11:37 p.m. | Last Modified: 7 Mar 2022, 11:37 p.m.
Panel Version: 2.66
Comment on list classification: Promoting from grey to amber, based on 2 cases plus some functional data. At the next GMS review it could be considered for green rating based on the external expert review.Created: 16 Jan 2021, 1:10 p.m. | Last Modified: 16 Jan 2021, 1:10 p.m.
Panel Version: 2.44
As expert reviewer notes, Arrondel et al 2019 (PMID:31481669) reports 3 children with Galloway-Mowat syndrome from 2 families of European ancestry. Using WES variants in YRDC were identified; in one family compound het variants (one missense, and one frameshift deletion leading to a stop codon) and in the other family a homozygous in frame deletion. In both families it was found that affected children showed the presence of YRDC transcripts and proteins in cells. Early-onset proteinuria was observed in all affected children. In addition to developmental delay, primary microcephaly was present in the two affected children of one family, and post-natal microcephaly in the other. Using yeast assays to express the human variants, they examined whether human YRDC cDNAs encoding wild-type and mutant proteins could rescue the sua5 deletion (YRDC ortholog) strain which showed a slow growth phentoype. The wild type and p.Ala84Val and p.Leu265del mutants could rescue the phenotype but the p.Val241Ilefs*72 mutant was unable to improve the growth. Patient fibroblasts show lower t6A levels than wildtype.Created: 16 Jan 2021, 1:05 p.m. | Last Modified: 16 Jan 2021, 1:05 p.m.
Panel Version: 2.43
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Galloway-Mowat syndrome MONDO:0009627
Publications
Zornitza Stark (Australian Genomics)
Three individuals from two unrelated families with typical features of Galloway-Mowat syndrome including proteinuria, microcephaly, developmental delay and brain malformations. Supportive functional data.
Sources: LiteratureCreated: 7 Sep 2020, 10:09 p.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
Galloway-Mowat syndrome
Publications
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Phenotypes
-
- Galloway-Mowat syndrome MONDO:0009627
- OMIM
- 612276
- Clinvar variants
- Variants in YRDC
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: YRDC were changed from Galloway-Mowat syndrome to Galloway-Mowat syndrome MONDO:0009627
Removed Tag
Eleanor Williams (Genomics England Curator)Tag for-review was removed from gene: YRDC.
Added New Source, Status Update
Eleanor Williams (Genomics England Curator)Source Expert Review Green was added to YRDC. Rating Changed from Amber List (moderate evidence) to Green List (high evidence)
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: yrdc has been classified as Amber List (Moderate Evidence).
Added Tag
Eleanor Williams (Genomics England Curator)Tag for-review tag was added to gene: YRDC.
Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes
Zornitza Stark (Australian Genomics)gene: YRDC was added gene: YRDC was added to Proteinuric renal disease. Sources: Literature Mode of inheritance for gene: YRDC was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: YRDC were set to 31481669 Phenotypes for gene: YRDC were set to Galloway-Mowat syndrome Review for gene: YRDC was set to GREEN gene: YRDC was marked as current diagnostic