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Congenital muscular dystrophy and congenital myopathy

Gene: CNTN1

Amber List (moderate evidence)

CNTN1 (contactin 1)
EnsemblGeneIds (GRCh38): ENSG00000018236
EnsemblGeneIds (GRCh37): ENSG00000018236
OMIM: 600016, Gene2Phenotype
CNTN1 is in 3 panels

6 reviews

Eleanor Williams (Genomics England Curator)

Removing the Q3_21_NHS_review tag. There are currently only 2 cases so amber is the appropriate rating.
Created: 1 Feb 2023, 5:17 p.m. | Last Modified: 1 Feb 2023, 5:17 p.m.
Panel Version: 3.14

Rhiannon Mellis (Great Ormond Street Hospital)

I don't know

A second consanguineous family now reported with lethal congenital myopathy/FADS
Created: 10 Sep 2021, 1:22 p.m. | Last Modified: 10 Sep 2021, 1:22 p.m.
Panel Version: 2.56

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Fetal akinesia deformation sequence

Publications

Louise Daugherty (Genomics England Curator)

I don't know

Gene rating and review submitted by Rachael Mein, Viapath Guy's Hospital February 2019 on on behalf of London South GLH for the GMS Neurology specialist test group.
Created: 30 Apr 2019, 10:09 a.m.

Rachael Mein (Viapath at Guy's Hospital)

Green List (high evidence)

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
?Myopathy, congenital, Compton-North, 612540

Publications

Variants in this GENE are reported as part of current diagnostic practice

Anna Sarkozy (Great Ormond Street Hospital)

I don't know

single family reported with CNTN1 variant.
Created: 30 May 2019, 4:40 p.m.
this is an interesting gene but not sure re strong evidence for this
Created: 6 Mar 2017, 12:14 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
?Myopathy, congenital, Compton-North, 612540

Publications

Helen Brittain (Genomics England Curator)

Red List (low evidence)

Comment on list classification: Expert contacted to see if there are additional cases to the single published to date. Amber and watchlist on current evidence.
Created: 7 Mar 2017, 2:39 p.m.
Comment when marking as ready: Insufficient evidence. One family
Created: 3 Feb 2017, 11:47 a.m.
Comment on list classification: Only one family identified to date
Created: 3 Feb 2017, 11:47 a.m.
Only one published family to date. Severe myopathy / myasthenic syndrome overlap. Currently insufficient evidence.
Created: 30 Jan 2017, 2:46 p.m.

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
?Myopathy, congenital, Compton-North 612540

Publications

Details

Mode of Inheritance
BIALLELIC, autosomal or pseudoautosomal
Sources
  • London South GLH
  • Radboud University Medical Center, Nijmegen
  • Expert Review Amber
  • NHS GMS
Phenotypes
  • Myopathy, congenital, Compton-North, OMIM:612540
Tags
watchlist
OMIM
600016
Clinvar variants
Variants in CNTN1
Penetrance
Complete
Publications
Panels with this gene

History Filter Activity

3 Feb 2023, Gel status: 2

Created, Added New Source, Added Tag, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

Arina Puzriakova (Genomics England Curator)

gene: CNTN1 was added gene: CNTN1 was added to Congenital muscular dystrophy and congenital myopathy. Sources: NHS GMS,Expert Review Amber,Radboud University Medical Center, Nijmegen,London South GLH watchlist tags were added to gene: CNTN1. Mode of inheritance for gene: CNTN1 was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: CNTN1 were set to 19026398; 32779773 Phenotypes for gene: CNTN1 were set to Myopathy, congenital, Compton-North, OMIM:612540 Penetrance for gene: CNTN1 were set to Complete