STRs in panel
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Congenital muscular dystrophy and congenital myopathy

Gene: VPS33B

Red List (low evidence)

VPS33B (VPS33B, late endosome and lysosome associated)
EnsemblGeneIds (GRCh38): ENSG00000184056
EnsemblGeneIds (GRCh37): ENSG00000184056
OMIM: 608552, Gene2Phenotype
VPS33B is in 18 panels

4 reviews

Louise Daugherty (Genomics England Curator)

I don't know

Comment on list classification: Changed from Green to Red. Updated rating from Anna Sarkozy as a result of GLH Test Group prior to sign off- do NOT cause neuromuscular forms of arthrgrogryposis
Created: 3 Dec 2019, 3:23 p.m. | Last Modified: 3 Dec 2019, 3:23 p.m.
Panel Version: 1.203
Comment on list classification: Changed from Amber to Green. Gene referred to Genomics England clinical team due to review by the GMS Neurology specialist test group. It was agreed that as this represents a clinical continuum, we should represent the genes on both Congenital myopathy and Arthrogryposis panels as for Genomic Medicine Service it is possible that diagnoses could come from either route so we would not want to miss them. For the 100K Genomes Project participants we tended to apply both Congenital myopathy and Arthrogryposis panels, even though there was a more arbitrary line drawn between contractures / not for allocating genes to a particular panel. Appropriate phenotype, sufficient cases and external expert review all support gene-disease association and relevance to this panel to rate gene as Green.
Created: 18 Oct 2019, 1:15 p.m. | Last Modified: 18 Oct 2019, 1:19 p.m.
Panel Version: 1.191
Gene rating and review submitted by Rachael Mein, Viapath Guy's Hospital February 2019 on on behalf of London South GLH for the GMS Neurology specialist test group.
Created: 30 Apr 2019, 10:09 a.m.

Rachael Mein (Viapath at Guy's Hospital)

Green List (high evidence)

Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal

Phenotypes
Arthrogryposis renal dysfunction, and cholestasis 1 208085

Publications

Variants in this GENE are reported as part of current diagnostic practice

Helen Brittain (Genomics England Curator)

Comment when marking as ready: Reviewer contacted to see if they have cases of myopathy, without arthrogryposis. If this is the case, it should be green on this panel. Otherwise leave as amber pending further phenotypic evidence, but green on arthrogryposis.
Created: 7 Mar 2017, 4:37 p.m.
Comment on list classification: Arthrogryposis rather than myopathy. Green on arthrogryposis panel.
Created: 7 Mar 2017, 4:35 p.m.

Anna Sarkozy (Great Ormond Street Hospital)

Green List (high evidence)

Phenotypes
vacuolar myopathy?

History Filter Activity

6 Feb 2023, Gel status: 1

Created, Added New Source, Set mode of inheritance, Set publications, Set Phenotypes, Set penetrance

Arina Puzriakova (Genomics England Curator)

gene: VPS33B was added gene: VPS33B was added to Congenital muscular dystrophy and congenital myopathy. Sources: NHS GMS,Expert Review Red,London South GLH,Expert Review Mode of inheritance for gene: VPS33B was set to BIALLELIC, autosomal or pseudoautosomal Publications for gene: VPS33B were set to 15052268; 16896922 Phenotypes for gene: VPS33B were set to Arthrogryposis, renal dysfunction, and cholestasis 1, OMIM:208085 Penetrance for gene: VPS33B were set to Complete