Early onset dystonia
Gene: SLC30A10EnsemblGeneIds (GRCh38): ENSG00000196660
EnsemblGeneIds (GRCh37): ENSG00000196660
OMIM: 611146, Gene2Phenotype
SLC30A10 is in 10 panels
3 reviews
Arianna Tucci (Department of Molecular Neuroscience, UCL Institute of Neurology, Queen Square)
Comment from the Parkinson panel: Biallelic mutations cause hypermanganesemia with dystonia-1 (HMNDYT1), increased serum manganese, motor neurodegeneration with extrapyramidal features, polycythemia, and hepatic dysfunction, Brain MRI shows hyperintensities in the basal ganglia). PMID: 22341971 (2 consang families with two consanguineous families with neurologic disorders including juvenile-onset dystonia, adult-onset parkinsonism, severe hypermanganesemia, polycythemia, and chronic hepatic disease, including steatosis and cirrhosis), 22341972 (8 families with HMNDYT1), 22926781 (one pt, and treatment: intravenous disodium calcium edetate (CaNa2-EDTA ethylenediaminetetraacetic acid), 1 g twice-daily (BD) over 5 days led to significantly increased 24-hour urinary manganese (12,852 nmol after 5 days) and reduced blood manganese levels. THIS IS ONE OF THE FEW DYSTONA-PARKINSONISM that is treatable), 22934317 (this is a gene review for this disorder). Keep this gene in both this gene to both the dystonia panel and pd.Created: 15 Dec 2016, 11:10 a.m.
Mode of inheritance
BIALLELIC, autosomal or pseudoautosomal
Phenotypes
hypermanganesemia with dystonia-1 (HMNDYT1), increased serum manganese, motor neurodegeneration with extrapyramidal features, polycythemia, and hepatic dysfunction, Brain MRI shows hyperintensities in the basal ganglia
Publications
Ellen McDonagh (Genomics England Curator)
Comment on list classification: >3 unrelated cases reported on OMIM for different variants in patients from different ethnicities.Created: 25 Aug 2016, 10 a.m.
This gene is not mentioned in the UCLH National Hospital for Neurology and Neurosurgery & Institute of Neurology (NHNN) Neurogenetics genetic testing manual.Created: 10 Jun 2016, 8:35 a.m.
Ellen Thomas (Genomics England Curator)
Comment on list classification: Potentially treatable metabolic defect that can present with dystoniaCreated: 27 May 2016, 9:42 a.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- Radboud University Medical Center, Nijmegen
- Illumina TruGenome Clinical Sequencing Services
- Phenotypes
-
- Hypermanganesemia with dystonia 1, OMIM:613280
- Dystonia/Parkinsonism, Hypermanganesemia, Polycythemia, and Chronic Liver Disease
- Tags
- OMIM
- 611146
- Clinvar variants
- Variants in SLC30A10
- Penetrance
- Complete
- Publications
- Panels with this gene
-
- Neonatal cholestasis
- Undiagnosed metabolic disorders
- Adult onset neurodegenerative disorder
- Hereditary Erythrocytosis
- Childhood onset dystonia, chorea or related movement disorder
- Structural basal ganglia disorders
- Likely inborn error of metabolism
- Parkinson Disease and Complex Parkinsonism
- Adult onset dystonia, chorea or related movement disorder
- Early onset dystonia
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: SLC30A10 were changed from Dystonia/Parkinsonism, Hypermanganesemia, Polycythemia, andChronic Liver Disease; Hypermanganesemia with dystonia, polycythemia, and cirrhosis, 613280 to Hypermanganesemia with dystonia 1, OMIM:613280; Dystonia/Parkinsonism, Hypermanganesemia, Polycythemia, and Chronic Liver Disease
Set publications
Ellen McDonagh (Genomics England Curator)Publications for SLC30A10 were set to 25778823;22341971; 22341972; 22926781; 22934317
panel promoted to version 1
Ellen McDonagh (Genomics England Curator)17th Oct 2016: Promoted to version 1. The panel was revised after expert input and internal discussion with the clinical team. Other panels such as hereditary ataxia or dementia may be applied in conjunction with this panel where appropriate for genome analysis.
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Gene classified by Genomics England curator
Ellen Thomas (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Ellen Thomas (Genomics England Curator)Publications for SLC30A10 were set to PMID: 25778823
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene SLC30A10 was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene SLC30A10 was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene SLC30A10 was changed to BIALLELIC, autosomal or pseudoautosomal
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Model of inheritance for gene SLC30A10 was changed to BIALLELIC, autosomal or pseudoautosomal
Added New Source
GEL ()SLC30A10 was added to Early onset dystoniapanel. Sources: Radboud University Medical Center, Nijmegen
Added New Source
GEL ()SLC30A10 was added to Early onset dystoniapanel. Sources: Illumina TruGenome Clinical Sequencing Services