Bilateral congenital or childhood onset cataracts
Gene: SIX5EnsemblGeneIds (GRCh38): ENSG00000177045
EnsemblGeneIds (GRCh37): ENSG00000177045
OMIM: 600963, Gene2Phenotype
SIX5 is in 11 panels
2 reviews
Sarah Waller (Manchester Centre for Genomic Medicine)
BOR has variable expressivity and penetrance. SIX5 interacts with EYA1 in c.elegans. EYA1 mutations have ben reported to be associated with cataracts, however SIX5 mutations have not (Hoskins et al, 2007, Am J Hum Genet 80:800). Krug et al (2011) suggest that these SIX5 mutations may not be cause of BOR (Hum Mutat 32:183-190).Created: 25 May 2016, 8:11 a.m.
Phenotypes
Broanchiootorenal syndrome
Variants in this GENE are reported as part of current diagnostic practice
Ellen McDonagh (Genomics England Curator)
Comment on list classification: Demoted to the red list due to expert review.Created: 31 May 2016, 11:10 a.m.
Is on the Manchester congenital cataracts gene panel, and is a confirmed DD gene for Branchiootorenal syndrome 2 (however I am unsure whether cataracts is involved in this disease).Created: 29 Apr 2016, 2:20 p.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
- Sources
-
- Expert Review Red
- UKGTN
- Phenotypes
-
- Branchiootorenal syndrome 2, OMIM:610896
- OMIM
- 600963
- Clinvar variants
- Variants in SIX5
- Penetrance
- Complete
- Panels with this gene
-
- Unexplained young onset end-stage renal disease - additional genes
- Deafness and congenital structural abnormalities
- Unexplained kidney failure in young people
- Ductal plate malformation
- DDG2P
- Monogenic hearing loss
- Fetal anomalies
- Clefting
- Bilateral congenital or childhood onset cataracts
- Intellectual disability
- CAKUT
History Filter Activity
Set Phenotypes
Arina Puzriakova (Genomics England Curator)Phenotypes for gene: SIX5 were changed from Broanchiootorenal syndrome to Branchiootorenal syndrome 2, OMIM:610896
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Set Phenotypes
Ellen McDonagh (Genomics England Curator)Phenotypes for SIX5 were set to Broanchiootorenal syndrome
Set Mode of Inheritance
Ellen McDonagh (Genomics England Curator)Mode of inheritance for SIX5 was changed to MONOALLELIC, autosomal or pseudoautosomal, imprinted status unknown
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Red List (Low Evidence).
Gene classified by Genomics England curator
Ellen McDonagh (Genomics England Curator)This gene has been classified as Amber List (Moderate Evidence).
Added New Source
GEL ()SIX5 was added to Cataractspanel. Sources: UKGTN