Congenital disorders of glycosylation
Gene: PGAP2EnsemblGeneIds (GRCh38): ENSG00000148985
EnsemblGeneIds (GRCh37): ENSG00000148985
OMIM: 615187, Gene2Phenotype
PGAP2 is in 8 panels
2 reviews
Sarah Leigh (Genomics England Curator)
GlyGen link updated April 2021: https://www.glygen.org/protein/Q9UHJ9-1#DiseaseCreated: 8 Apr 2021, 1:27 p.m. | Last Modified: 8 Apr 2021, 1:27 p.m.
Panel Version: 2.66
Comment when marking as ready: Associated with phenotype in OMIM and as a confirmed Developmental Disorder Gene / G2P. At least 5 variants reported 4 cases.Created: 19 Dec 2016, 10:41 a.m.
Details
- Mode of Inheritance
- BIALLELIC, autosomal or pseudoautosomal
- Sources
-
- Expert Review Green
- UKGTN
- Radboud University Medical Center, Nijmegen
- Literature
- Emory Genetics Laboratory
- Phenotypes
-
- Hyperphosphatasia with mental retardation syndrome 3 614207
- PGAP2-CDG (Disorders of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation)
- OMIM
- 615187
- Clinvar variants
- Variants in PGAP2
- Penetrance
- Complete
- Publications
- Panels with this gene
History Filter Activity
panel promoted to version 1
Sarah Leigh (Genomics England Curator)Promoted to V1 19th December 2016
Gene classified by Genomics England curator
Sarah Leigh (Genomics England Curator)This gene has been classified as Green List (High Evidence).
Set publications
Sarah Leigh (Genomics England Curator)Publications for PGAP2 were set to 23561846; 23561847
Added New Source
Sarah Leigh (Genomics England Curator)PGAP2 was added to Congenital disorders of glycosylationpanel. Source: UKGTN
Added New Source
Sarah Leigh (Genomics England Curator)PGAP2 was added to Congenital disorders of glycosylationpanel. Source: Radboud University Medical Center, Nijmegen
Set Mode of Inheritance, Added New Source
Sarah Leigh (Genomics England Curator)PGAP2 was added to Congenital disorders of glycosylationpanel. Source: Literature Model of inheritance for gene PGAP2 was set to BIALLELIC, autosomal or pseudoautosomal
Created
Sarah Leigh (Genomics England Curator)PGAP2 was created by sleigh
Added New Source
Sarah Leigh (Genomics England Curator)PGAP2 was added to Congenital disorders of glycosylationpanel. Sources: Emory Genetics Laboratory