Renal tubulopathies
Gene: FXYD2EnsemblGeneIds (GRCh38): ENSG00000137731
EnsemblGeneIds (GRCh37): ENSG00000137731
OMIM: 601814, Gene2Phenotype
FXYD2 is in 3 panels
1 review
Eleanor Williams (Genomics England Curator)
Comment on list classification: Changing rating from red to amber. 3 cases reported by all with the same variant which is likely a founder effect.Created: 4 Sep 2019, 9:32 p.m. | Last Modified: 4 Sep 2019, 9:32 p.m.
Panel Version: 1.116
Associated with Hypomagnesemia 2, renal #154020 in OMIM.
PMID: 11062458 - Meij et al 2000 - Identified a heterozygous mutation, 123G→A in FXYD2 in a large Dutch family with dominant hypomagnesaemia which cosegregated with the disorder. The mutation causes the substitution of the conserved glycine 41 within the putative transmembrane domain by arginine.
PMID: 25765846 - de Baaij et al 2015 - two families (Dutch and Belgian) with hypomagnesaemia and hypocalciuria were screened for mutations in the FXYD2 gene. The same mutation as reported before was found in these families, c.115G>A, p.Gly41Arg, and haplotype analysis revealed an overlapping haplotype in all families, suggesting a founder effect.
3 cases but likely linked by common ancestor as same variant found in all three.Created: 30 Aug 2019, 3:28 p.m. | Last Modified: 4 Sep 2019, 9:31 p.m.
Panel Version: 1.115
This gene was part of an initial gene list collated by Emma Ashton (NE Thames Regional Genetics laboratory, GOSH NHS Foundation Trust) January 2019 on behalf of the GMS Renal Specialist Test Group; Gene Symbol submitted: FXYD2; Suggested initial gene rating: green; Evidence for inclusion: none provided; Evidence for exclusion: none provided; Technical notes (e.g. non-coding/CNV mutations requiring coverage?): none providedCreated: 3 Feb 2019, 11:32 a.m.
Mode of inheritance
MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Phenotypes
Hypomagnesemia 2, renal MIM 154020
Variants in this GENE are reported as part of current diagnostic practice
Details
- Mode of Inheritance
- MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
- Sources
-
- Expert Review Amber
- NHS GMS
- Phenotypes
-
- Hypomagnesemia 2, renal, 154020
- OMIM
- 601814
- Clinvar variants
- Variants in FXYD2
- Penetrance
- None
- Publications
- Panels with this gene
History Filter Activity
Entity classified by Genomics England curator
Eleanor Williams (Genomics England Curator)Gene: fxyd2 has been classified as Amber List (Moderate Evidence).
Set publications
Eleanor Williams (Genomics England Curator)Publications for gene: FXYD2 were set to
Set mode of inheritance
Eleanor Williams (Genomics England Curator)Mode of inheritance for gene: FXYD2 was changed from to MONOALLELIC, autosomal or pseudoautosomal, NOT imprinted
Set Phenotypes
Eleanor Williams (Genomics England Curator)Phenotypes for gene: FXYD2 were changed from to Hypomagnesemia 2, renal, 154020
Created, Added New Source, Set mode of inheritance
Eleanor Williams (Genomics England Curator)gene: FXYD2 was added gene: FXYD2 was added to Renal tubulopathies. Sources: NHS GMS Mode of inheritance for gene: FXYD2 was set to